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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oSJ | 20183 | 2022-04-04 | 2019-05-01 | 2.8 | 2.81 | — | 2.8 | 0.011 | 1.13 | 0.0 | 0.07 | 13.69 | 0.00 | 2.227 | 10.71 | 0.00 | 18.6 | 79.7 | 1.7 | -4.71 | 0.50 | 0.79 | 4.82 | 2.8 | 0.003 | 0.75 | 0.0 | 0.06 | 16.79 | 0.00 | 2.235 | 9.22 | 5.81 | 13.4 | 86.6 | 0.0 | -3.82 | 0.47 | 0.52 | 0.80 | 4.30 | 4210 | 610 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QQ5 | 4618 | 2022-04-05 | 2019-02-17 | 3.9 | 3.85 | — | 3.8 | 0.007 | 1.07 | 0.0 | 0.06 | 14.96 | 0.01 | 1.792 | 4.89 | 0.00 | 8.7 | 91.3 | 0.0 | -6.09 | 0.71 | 0.84 | 3.00 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 16.31 | 0.00 | 2.106 | 7.49 | 0.17 | 6.3 | 93.7 | 0.0 | -1.75 | 0.45 | 0.73 | 0.83 | 2.18 | 11829 | 1476 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 6FN4 | 4282 | 2022-04-05 | 2018-02-02 | 4.14 | 4.24 | — | 4.2 | 0.005 | 0.80 | 0.0 | 0.05 | 9.96 | 0.01 | 2.096 | 8.91 | 0.00 | 7.5 | 91.3 | 1.2 | -2.94 | 0.68 | 0.75 | — | 4.2 | 0.011 | 0.82 | 0.0 | 0.04 | 12.43 | 0.01 | 2.163 | 8.83 | 0.00 | 4.1 | 95.8 | 0.1 | 0.34 | 1.63 | 0.70 | 0.74 | — | 12702 | 1626 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6JBJ | 9791 | 2022-04-04 | 2019-01-25 | 3.6 | 3.75 | — | 3.7 | 0.008 | 1.04 | 0.0 | 0.06 | 16.15 | 0.01 | 2.206 | 10.53 | 0.00 | 9.1 | 90.9 | 0.0 | -6.19 | 0.65 | 0.83 | 2.03 | 3.7 | 0.004 | 0.81 | 0.0 | 0.04 | 18.28 | 0.01 | 2.081 | 18.24 | 0.40 | 8.6 | 91.4 | 0.0 | -2.07 | 0.63 | 0.64 | 0.82 | 1.05 | 9166 | 1130 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2022-04-04 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.94 | 0.0 | 0.05 | 12.39 | 0.01 | 2.260 | 21.55 | 0.00 | 7.9 | 92.1 | 0.0 | -1.85 | 2.19 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DMR | 7965 | 2022-04-06 | 2018-06-05 | 3.9 | 4.25 | — | 4.2 | 0.005 | 0.91 | 0.0 | 0.05 | 10.34 | 0.01 | 2.280 | 3.54 | 0.00 | 4.2 | 95.8 | 0.0 | -4.22 | 0.62 | 0.70 | 1.82 | 4.1 | 0.002 | 0.62 | 0.0 | 0.04 | 14.97 | 0.00 | 2.278 | 6.37 | 0.10 | 3.1 | 96.9 | 0.0 | -0.45 | 1.74 | 0.75 | 0.87 | 1.48 | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XWo | 10633 | 2022-04-04 | 2020-01-24 | 3.39 | 4.01 | — | 3.8 | 0.006 | 0.69 | 0.0 | 0.04 | 13.23 | 0.01 | 2.167 | 9.83 | 0.00 | 6.0 | 94.0 | 0.0 | -3.53 | 0.74 | 0.82 | 1.64 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 14.92 | 0.00 | 2.197 | 9.83 | 0.00 | 3.5 | 96.5 | 0.0 | 0.87 | 0.51 | 0.73 | 0.86 | 1.15 | 9555 | 1281 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NF6 | 9361 | 2022-04-04 | 2018-12-18 | 3.32 | 3.42 | — | 3.4 | 0.007 | 0.98 | 0.0 | 0.06 | 15.65 | 0.01 | 2.309 | 4.98 | 0.00 | 4.5 | 95.2 | 0.3 | -2.74 | 0.54 | 0.79 | 2.76 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.56 | 0.00 | 2.131 | 11.89 | 0.41 | 4.0 | 96.0 | 0.0 | 2.48 | 0.56 | 0.56 | 0.80 | 2.45 | 6598 | 822 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6Ni2 | 9375 | 2022-04-05 | 2018-12-26 | 4.0 | 4.38 | — | 4.1 | 0.009 | 1.30 | 0.0 | 0.07 | 10.25 | 0.01 | 2.245 | 6.60 | 0.00 | 6.7 | 93.1 | 0.1 | -1.50 | 0.75 | 0.71 | — | 4.1 | 0.004 | 0.77 | 0.0 | 0.05 | 14.90 | 0.01 | 2.147 | 14.71 | 0.35 | 5.7 | 94.3 | 0.0 | 0.22 | 1.38 | 0.75 | 0.73 | — | 5381 | 704 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ERi | 3941 | 2022-04-10 | 2017-10-18 | 3.0 | 3.06 | 3.00 | 3.0 | 0.003 | 0.45 | 0.0 | 0.03 | 11.66 | 0.00 | 1.251 | 2.49 | 0.00 | 4.3 | 95.7 | 0.0 | -3.80 | 0.66 | 0.74 | 2.70 | 3.0 | 0.005 | 0.65 | 0.0 | 0.04 | 14.85 | 0.01 | 1.800 | 8.30 | 3.44 | 5.3 | 94.7 | 0.0 | -0.78 | 1.22 | 0.83 | 0.86 | 2.54 | 145026 | 6178 | 66 | 4401 | 515 | 0 | 0 | logfile |
✔ | 5iRX | 8117 | 2022-04-05 | 2016-03-14 | 2.95 | 3.39 | 2.91 | 3.3 | 0.014 | 1.44 | 0.0 | 0.07 | 15.36 | 0.01 | 1.744 | 9.65 | 0.00 | 10.7 | 89.2 | 0.1 | -6.45 | 0.67 | 0.77 | 3.80 | 3.4 | 0.004 | 0.69 | 0.0 | 0.04 | 16.93 | 0.00 | 2.250 | 7.69 | 1.54 | 8.5 | 91.5 | 0.0 | -1.10 | 0.67 | 0.63 | 0.82 | 2.03 | 13162 | 1726 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 5L93 | 4015 | 2022-04-08 | 2016-06-09 | 3.9 | 4.05 | — | 4.1 | 0.004 | 0.92 | 0.0 | 0.04 | 8.71 | 0.00 | 1.566 | 7.24 | 0.00 | 9.8 | 90.2 | 0.0 | -2.97 | 0.53 | 0.75 | 1.23 | 4.0 | 0.005 | 0.79 | 0.0 | 0.04 | 17.20 | 0.01 | 2.158 | 12.49 | 0.39 | 7.5 | 92.4 | 0.2 | 0.31 | 1.72 | 0.56 | 0.82 | 1.30 | 31212 | 4032 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 5YRN | 6842 | 2022-04-04 | 2017-11-09 | 4.1 | 3.09 | 3.51 | 6.7 | 0.007 | 1.00 | 0.0 | 0.05 | 10.65 | 0.00 | 2.371 | 8.18 | 0.00 | 4.7 | 95.3 | 0.0 | -3.39 | 0.53 | 0.56 | — | 3.8 | 0.004 | 0.87 | 0.0 | 0.04 | 14.72 | 0.00 | 2.104 | 21.86 | 0.00 | 3.4 | 96.6 | 0.0 | -0.52 | 2.86 | 0.63 | 0.78 | — | 8280 | 1044 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5WK6 | 8856 | 2022-04-10 | 2017-07-24 | 4.3 | 4.51 | — | 4.5 | 0.013 | 1.25 | 0.0 | 0.05 | 10.13 | 0.01 | 2.029 | 21.17 | 0.00 | 7.2 | 92.8 | 0.0 | -3.04 | 0.36 | 0.74 | — | 4.5 | 0.004 | 0.67 | 0.0 | 0.04 | 14.45 | 0.00 | 1.846 | 19.51 | 0.05 | 8.9 | 91.1 | 0.0 | 1.44 | 2.46 | 0.39 | 0.76 | — | 161663 | 11029 | 41 | 0 | 0 | 0 | 80524 | logfile |
✔ | 6HRE | 0259 | 2022-04-04 | 2018-09-26 | 3.2 | 2.74 | 2.87 | 3.3 | 0.019 | 1.47 | 0.0 | 0.11 | 13.34 | 0.01 | 2.474 | 6.01 | 0.00 | 12.0 | 88.0 | 0.0 | -4.17 | 0.32 | 0.80 | 4.40 | 2.8 | 0.007 | 0.94 | 0.0 | 0.05 | 17.28 | 0.00 | 2.123 | 9.22 | 0.50 | 9.3 | 90.7 | 0.0 | -3.49 | 0.81 | 0.30 | 0.78 | 3.87 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UPK | 20840 | 2022-04-05 | 2019-10-17 | 4.9 | 7.69 | 6.08 | 7.1 | 0.005 | 0.94 | 0.0 | 0.05 | 20.35 | 0.01 | 1.570 | 20.39 | 0.00 | 7.2 | 92.8 | 0.0 | -3.94 | 0.89 | 0.77 | — | 7.0 | 0.003 | 0.67 | 0.0 | 0.04 | 22.35 | 0.00 | 1.960 | 22.55 | 0.00 | 5.1 | 94.9 | 0.0 | -1.43 | 2.95 | 0.90 | 0.83 | — | 13861 | 1314 | 10 | 144 | 54 | 0 | 0 | logfile |
✔ | 5N8o | 3601 | 2022-04-05 | 2017-02-23 | 3.9 | 4.00 | — | 3.9 | 0.008 | 1.26 | 0.0 | 0.07 | 11.99 | 0.01 | 1.878 | 9.72 | 0.00 | 15.0 | 84.8 | 0.2 | -5.69 | 0.75 | 0.77 | 1.84 | 3.9 | 0.004 | 0.91 | 0.0 | 0.04 | 16.22 | 0.00 | 2.142 | 15.53 | 0.43 | 12.3 | 87.7 | 0.0 | -2.49 | 2.29 | 0.77 | 0.78 | 0.94 | 11362 | 1432 | 2 | 18 | 0 | 0 | 0 | logfile |
✔ | 6GTD | 0062 | 2022-04-04 | 2018-06-18 | 4.24 | 4.28 | — | 3.9 | 0.009 | 1.26 | 0.0 | 0.08 | 21.74 | 0.01 | 2.138 | 13.01 | 0.00 | 19.8 | 80.2 | 0.0 | -5.72 | 0.78 | 0.65 | — | 3.9 | 0.006 | 0.87 | 0.0 | 0.06 | 20.44 | 0.00 | 1.993 | 20.74 | 0.00 | 19.9 | 80.1 | 0.0 | -3.31 | 0.98 | 0.79 | 0.67 | — | 6456 | 1269 | 4 | 66 | 0 | 0 | 0 | logfile |
✔ | 6HCR | 0198 | 2022-04-19 | 2018-08-16 | 3.5 | 3.63 | — | 3.6 | 0.007 | 1.10 | 0.0 | 0.06 | 11.32 | 0.01 | 2.353 | 2.91 | 0.00 | 14.7 | 85.3 | 0.0 | -4.63 | 0.83 | 0.87 | 3.48 | 3.6 | 0.005 | 0.75 | 0.0 | 0.05 | 14.80 | 0.00 | 2.133 | 6.91 | 0.33 | 14.5 | 85.5 | 0.0 | -3.27 | 0.53 | 0.84 | 0.88 | 2.72 | 213720 | 26460 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oo2 | 20142 | 2022-04-05 | 2019-04-22 | 4.4 | 4.52 | — | 3.5 | 0.007 | 1.14 | 1.0 | 0.07 | 13.96 | 0.01 | 2.037 | 7.03 | 0.00 | 7.1 | 92.3 | 0.6 | -3.55 | 0.75 | 0.61 | — | 2.5 | 0.004 | 0.74 | 0.0 | 0.04 | 12.97 | 0.00 | 0.867 | 17.91 | 0.00 | 5.8 | 94.2 | 0.0 | 1.38 | 1.01 | 0.86 | 0.80 | — | 16691 | 2436 | 24 | 0 | 19 | 0 | 0 | logfile |