Table showing results for October 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6ZBB	11149	2021-10-05	2020-06-08	3.61	3.81	3.50	3.7	0.008	0.94	0.0	0.23	15.58	0.00	1.960	15.86	0.00	6.1	93.9	0.0	-0.21	0.64	0.79	1.49	3.7	0.003	0.62	0.0	0.04	16.19	0.00	2.019	13.78	0.77	2.9	97.1	0.0	1.43	0.57	0.64	0.79	1.43	20936	1328	20	0	5	0	10446	logfile
✔	6Z1R	11039	2021-10-04	2020-05-14	3.29	3.42	3.09	3.3	0.007	0.71	0.0	0.04	15.06	0.00	1.890	9.02	0.00	6.6	93.4	0.0	-1.25	0.69	0.83	2.88	3.3	0.004	0.56	0.0	0.04	16.00	0.00	1.757	7.52	0.09	4.9	95.1	0.0	0.13	1.54	0.70	0.85	2.44	65754	4278	32	0	11	17	33137	logfile
✔	6W6W	21567	2021-10-04	2020-03-17	3.0	3.23	—	3.1	0.006	0.99	1.0	0.06	14.87	0.01	2.303	2.69	0.00	12.1	87.6	0.3	-5.09	0.64	0.84	3.49	3.1	0.004	0.75	0.0	0.05	16.44	0.00	2.225	7.30	1.68	10.0	89.9	0.1	-2.30	1.20	0.66	0.86	3.24	10981	1388	6	4	1	0	0	logfile
✔	6ZPi	11340	2021-10-03	2020-07-08	4.5	4.63	—	4.4	0.014	1.17	3.0	0.07	15.30	0.01	1.667	13.68	0.00	4.6	95.4	0.0	-0.24	0.77	0.52	—	4.4	0.003	0.73	0.0	0.04	14.12	0.00	1.975	16.48	0.00	3.7	96.3	0.0	0.34	1.80	0.85	0.79	—	9412	1184	6	1	5	0	0	logfile
✔	7C8K	30306	2021-10-03	2020-06-02	3.2	3.18	—	3.1	0.002	0.49	0.0	0.04	13.54	0.00	2.001	4.88	0.00	3.2	96.8	0.0	-1.52	0.82	0.78	2.09	3.2	0.004	0.63	0.0	0.04	15.58	0.00	2.216	9.44	0.40	4.5	95.5	0.0	1.25	1.13	0.85	0.83	2.99	4853	596	3	0	6	0	0	logfile
✔	6ZiQ	11228	2021-10-05	2020-06-26	4.33	3.58	4.02	3.4	0.005	0.73	0.0	0.08	14.67	0.00	1.911	18.83	0.00	8.6	91.4	0.0	-1.50	0.48	0.72	—	3.4	0.003	0.61	0.0	0.08	14.68	0.00	1.960	12.06	0.08	4.5	95.5	0.0	1.03	0.61	0.47	0.71	—	22255	1385	15	0	0	0	11316	logfile
✔	6YJ5	10816	2021-10-03	2020-04-02	3.5	2.92	3.56	3.3	0.007	0.87	0.0	0.05	13.19	0.01	2.183	4.49	0.00	12.5	87.5	0.0	-5.13	0.42	0.62	3.01	3.3	0.005	0.75	0.0	0.05	15.53	0.01	2.236	8.98	0.61	10.2	89.8	0.0	-2.25	0.85	0.51	0.73	2.85	2061	306	1	0	0	0	0	logfile
✔	6ZRF	11380	2021-10-03	2020-07-13	3.6	3.66	1.96	3.6	0.014	1.03	0.0	0.05	13.43	0.00	1.993	39.08	0.00	4.9	95.1	0.0	-6.22	0.67	0.79	1.84	3.7	0.007	0.86	0.0	0.05	14.96	0.00	2.128	29.34	0.42	15.2	84.8	0.0	-5.99	0.53	0.71	0.82	3.09	2220	300	12	0	0	0	0	logfile
✔	6ZRR	11383	2021-10-03	2020-07-14	4.0	4.04	3.78	4.3	0.015	1.20	0.0	0.06	13.24	0.00	2.189	26.93	0.00	5.0	95.0	0.0	-4.56	0.62	0.69	—	4.3	0.003	0.69	0.0	0.05	14.39	0.00	2.106	31.43	0.62	18.6	81.4	0.0	-4.86	2.47	0.68	0.76	—	5724	414	18	0	0	0	2664	logfile
✔	7KWZ	23059	2021-10-03	2020-12-02	3.2	3.41	—	3.4	0.006	0.80	0.0	0.05	12.48	0.00	2.271	12.59	0.00	7.3	92.7	0.0	-5.51	0.47	0.81	4.47	3.4	0.005	0.88	0.0	0.04	15.06	0.01	2.118	15.76	0.23	10.4	89.6	0.0	-5.39	1.05	0.50	0.84	4.14	4695	695	5	0	0	0	0	logfile
✔	6ZPo	11342	2021-10-06	2020-07-09	4.0	3.38	—	3.3	0.007	0.79	0.0	0.12	15.22	0.00	1.497	9.97	0.00	6.0	94.0	0.0	-0.81	0.67	0.75	—	3.3	0.004	0.57	0.0	0.04	16.23	0.00	1.783	8.01	0.26	4.7	95.3	0.0	0.16	0.42	0.67	0.76	—	80353	5150	42	0	16	17	40405	logfile
✔	7BX7	30235	2021-10-03	2020-04-17	2.8	2.94	—	2.9	0.009	0.84	0.0	0.04	12.96	0.00	2.228	15.34	0.00	9.3	90.7	0.0	-5.83	0.40	0.78	6.36	2.9	0.004	0.60	0.0	0.04	13.82	0.00	2.170	11.28	2.30	8.1	91.9	0.0	-5.48	1.13	0.40	0.78	6.34	1896	270	6	0	0	0	0	logfile
✔	7K45	22660	2021-10-03	2020-09-14	3.7	3.90	3.76	3.9	0.014	1.41	0.0	0.08	9.47	0.01	2.568	0.18	0.00	2.2	97.8	0.0	0.92	0.79	0.78	4.02	3.9	0.018	1.28	1.0	0.06	14.43	0.01	2.322	9.73	0.40	4.1	95.9	0.0	0.26	1.32	0.80	0.80	2.33	3038	419	4	0	2	0	0	logfile
✔	7D3S	30566	2021-10-03	2020-09-20	2.9	2.73	2.75	2.8	0.004	0.64	0.0	0.04	13.88	0.00	2.237	9.76	0.00	4.0	96.0	0.0	-2.28	0.56	0.75	3.07	2.9	0.003	0.53	0.0	0.04	16.91	0.00	2.114	8.91	1.45	2.8	97.2	0.0	1.23	0.50	0.60	0.78	2.35	8338	1048	6	0	0	0	0	logfile
✔	6YY0	11001	2021-10-03	2020-05-04	3.23	3.34	3.07	3.3	0.006	0.68	0.0	0.04	15.27	0.00	1.847	8.05	0.00	8.4	91.6	0.0	-0.84	0.72	0.84	2.97	3.3	0.006	0.74	1.0	0.04	16.15	0.00	1.815	6.35	0.12	4.3	95.7	0.0	0.24	0.34	0.73	0.85	2.67	61162	3926	25	0	11	17	30826	logfile
✔	6ZG7	11195	2021-10-04	2020-06-18	3.49	3.18	3.39	3.4	0.006	0.64	0.0	0.04	14.31	0.00	2.002	9.98	0.00	4.7	95.3	0.0	-0.05	0.54	0.78	2.53	3.4	0.004	0.56	0.0	0.04	15.82	0.00	1.988	7.82	0.26	3.7	96.3	0.0	1.18	0.48	0.55	0.79	2.12	15587	1048	11	0	0	0	7852	logfile
✔	7D1Z	30551	2021-10-04	2020-09-15	3.15	3.36	—	3.2	0.007	0.73	0.0	0.06	28.14	0.00	2.118	8.81	0.00	4.6	95.4	0.0	-2.13	0.82	0.85	2.63	3.2	0.003	0.64	0.0	0.05	28.02	0.00	2.126	9.26	0.13	3.4	96.6	0.0	2.03	0.47	0.83	0.86	2.50	13327	929	11	290	0	0	0	logfile
✔	6PM6	20389	2021-10-04	2019-07-01	2.9	3.37	—	3.4	0.004	0.89	0.0	0.05	10.24	0.01	2.335	5.13	0.00	4.9	95.1	0.0	-4.86	0.54	0.80	4.25	3.4	0.003	0.74	0.0	0.04	15.77	0.01	2.220	8.65	2.24	4.9	95.1	0.0	-0.68	0.76	0.53	0.80	3.55	14100	1735	15	0	15	0	0	logfile
✔	7DRW	30828	2021-10-05	2020-12-29	4.2	4.34	—	4.3	0.002	0.53	0.0	0.04	7.88	0.00	2.196	8.09	0.00	3.0	96.9	0.1	-2.45	0.62	0.49	—	4.3	0.007	0.90	1.0	0.05	13.52	0.01	1.885	20.39	0.05	3.6	96.3	0.1	0.23	2.37	0.74	0.70	—	71650	9108	42	0	0	0	0	logfile
✔	7ABH	11696	2021-10-04	2020-09-07	4.5	4.60	—	4.4	0.003	0.63	0.0	0.05	9.27	0.00	1.529	2.09	0.00	6.0	93.7	0.2	-2.78	0.75	0.77	—	4.4	0.005	0.81	0.0	0.04	10.69	0.00	2.150	4.36	0.00	9.7	90.2	0.0	-1.43	1.40	0.77	0.80	—	17922	3288	16	65	0	0	0	logfile

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