The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6Wi9 | 21683 | 2022-12-12 | 2020-04-09 | 4.3 | 4.37 | 4.24 | 4.3 | 0.002 | 0.50 | 0.0 | 0.04 | 12.85 | 0.00 | 2.214 | 5.56 | 0.00 | 4.2 | 95.8 | 0.0 | -3.72 | 0.77 | 0.78 | — | 4.3 | 0.003 | 0.70 | 0.0 | 0.04 | 13.90 | 0.00 | 2.148 | 14.34 | 0.11 | 6.7 | 93.3 | 0.0 | -0.74 | 0.80 | 0.78 | 0.78 | — | 8550 | 1108 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UWL | 20923 | 2022-12-11 | 2019-11-05 | 3.62 | 3.73 | — | 3.7 | 0.008 | 1.16 | 0.0 | 0.06 | 16.05 | 0.01 | 2.303 | 6.24 | 0.00 | 7.6 | 92.2 | 0.3 | -4.71 | 0.67 | 0.82 | 1.71 | 3.7 | 0.004 | 0.77 | 0.0 | 0.04 | 16.09 | 0.00 | 2.200 | 12.65 | 0.64 | 6.3 | 93.7 | 0.0 | -0.08 | 0.55 | 0.66 | 0.81 | 1.34 | 3029 | 402 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6RF8 | 4862 | 2022-12-13 | 2019-04-12 | 3.8 | 3.98 | — | 3.9 | 0.006 | 0.83 | 0.0 | 0.05 | 11.84 | 0.01 | 2.084 | 3.36 | 0.00 | 4.8 | 95.2 | 0.0 | -4.91 | 0.86 | 0.86 | 2.95 | 3.9 | 0.004 | 0.65 | 0.0 | 0.04 | 14.92 | 0.00 | 1.965 | 9.61 | 0.26 | 5.5 | 94.5 | 0.0 | -1.05 | 0.74 | 0.85 | 0.87 | 2.63 | 14407 | 1821 | 9 | 2 | 4 | 0 | 0 | logfile |
✔ | 6WJ3 | 21687 | 2022-12-12 | 2020-04-11 | 3.9 | 4.46 | 4.05 | 4.2 | 0.009 | 0.50 | 0.0 | 0.04 | 12.83 | 0.00 | 2.210 | 8.27 | 0.00 | 4.7 | 95.2 | 0.1 | -2.80 | 0.85 | 0.76 | 0.95 | 4.2 | 0.002 | 0.66 | 0.0 | 0.04 | 14.95 | 0.00 | 2.194 | 10.27 | 0.54 | 4.7 | 95.3 | 0.0 | -0.30 | 1.73 | 0.86 | 0.77 | 0.77 | 8912 | 1168 | 10 | 1 | 1 | 0 | 0 | logfile |
✔ | 6UWF | 20922 | 2022-12-11 | 2019-11-05 | 3.08 | 3.26 | — | 3.3 | 0.008 | 1.08 | 0.0 | 0.05 | 16.40 | 0.01 | 2.294 | 2.14 | 0.00 | 3.1 | 96.9 | 0.0 | -3.86 | 0.70 | 0.85 | 2.48 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.19 | 0.00 | 2.243 | 6.27 | 0.92 | 3.1 | 96.9 | 0.0 | 0.94 | 0.31 | 0.67 | 0.85 | 2.48 | 3178 | 417 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6Y5K | 10700 | 2022-12-12 | 2020-02-25 | 4.2 | 4.47 | 4.20 | 4.2 | 0.004 | 0.75 | 0.0 | 0.05 | 12.95 | 0.00 | 2.096 | 10.85 | 0.00 | 2.6 | 97.4 | 0.0 | -1.98 | 0.86 | 0.76 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.05 | 12.90 | 0.00 | 2.075 | 18.08 | 0.00 | 3.3 | 96.7 | 0.0 | -0.02 | 1.00 | 0.87 | 0.79 | — | 10614 | 1335 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 6LN8 | 0927 | 2022-12-11 | 2019-12-28 | 3.1 | 3.26 | 3.33 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 12.81 | 0.00 | 2.051 | 6.74 | 0.00 | 3.0 | 97.0 | 0.0 | -2.71 | 0.70 | 0.80 | 2.37 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.04 | 0.00 | 1.382 | 9.05 | 0.00 | 3.1 | 96.9 | 0.0 | 0.12 | 0.47 | 0.69 | 0.82 | 1.72 | 7739 | 1003 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6T7A | 10391 | 2022-12-12 | 2019-10-21 | 3.7 | 4.20 | 3.60 | 3.7 | 0.006 | 0.87 | 0.0 | 0.05 | 25.96 | 0.01 | 0.733 | 6.61 | 0.00 | 1.8 | 98.1 | 0.1 | -3.03 | 0.85 | 0.81 | 1.66 | 3.7 | 0.005 | 0.74 | 0.0 | 0.04 | 26.57 | 0.00 | 2.139 | 15.48 | 0.47 | 2.3 | 97.7 | 0.0 | 2.40 | 1.76 | 0.87 | 0.85 | 1.51 | 10338 | 847 | 11 | 190 | 0 | 0 | 0 | logfile |
✘ | 5YWP | 6855 | 2022-12-18 | 2017-11-29 | 4.6 | 5.26 | — | 20.0 | 0.005 | 0.98 | 0.0 | 0.05 | 9.48 | 0.01 | 2.023 | 48.83 | 0.00 | 7.3 | 92.1 | 0.6 | -3.63 | 0.12 | 0.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19561 | 2588 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2022-12-11 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.005 | 0.96 | 0.0 | 0.05 | 14.94 | 0.00 | 2.171 | 15.12 | 0.95 | 19.5 | 80.5 | 0.0 | -4.88 | 0.44 | 0.40 | 0.72 | 1.55 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6REV | 4858 | 2022-12-13 | 2019-04-12 | 3.8 | 3.81 | — | 3.8 | 0.006 | 0.87 | 0.0 | 0.05 | 11.71 | 0.01 | 2.117 | 2.65 | 0.00 | 5.6 | 94.4 | 0.0 | -5.13 | 0.82 | 0.85 | 3.29 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 14.89 | 0.00 | 1.978 | 8.48 | 0.19 | 4.5 | 95.5 | 0.0 | -1.34 | 2.11 | 0.81 | 0.86 | 2.57 | 14407 | 1821 | 9 | 2 | 4 | 0 | 0 | logfile |
✔ | 6YTo | 10920 | 2022-12-21 | 2020-04-24 | 4.24 | 4.32 | 4.19 | 4.3 | 0.005 | 0.70 | 0.0 | 0.04 | 13.41 | 0.00 | 2.282 | 10.25 | 0.00 | 1.9 | 98.1 | 0.0 | -0.08 | 0.67 | 0.83 | — | 4.3 | 0.003 | 0.64 | 0.0 | 0.04 | 13.46 | 0.00 | 2.204 | 9.22 | 0.06 | 2.5 | 97.5 | 0.0 | 2.64 | 0.71 | 0.67 | 0.83 | — | 41620 | 5340 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WHC | 21671 | 2022-12-12 | 2020-04-07 | 3.4 | 3.86 | 3.36 | 3.7 | 0.004 | 0.79 | 0.0 | 0.05 | 14.51 | 0.01 | 2.238 | 6.62 | 0.00 | 4.0 | 96.0 | 0.0 | -4.67 | 0.83 | 0.82 | 1.97 | 3.7 | 0.002 | 0.64 | 0.0 | 0.04 | 15.76 | 0.00 | 2.153 | 10.65 | 0.11 | 2.8 | 97.2 | 0.0 | -0.40 | 1.02 | 0.82 | 0.83 | 1.69 | 8709 | 1126 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V1X | 21018 | 2022-12-13 | 2019-11-21 | 3.5 | 3.62 | — | 3.7 | 0.011 | 1.19 | 4.0 | 0.07 | 10.58 | 0.01 | 2.279 | 4.06 | 0.00 | 9.5 | 90.3 | 0.2 | -3.79 | 0.49 | 0.59 | 1.89 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 14.65 | 0.00 | 2.145 | 5.59 | 0.45 | 6.1 | 93.6 | 0.3 | 0.62 | 2.00 | 0.57 | 0.79 | 2.46 | 13996 | 1784 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6LN9 | 0928 | 2022-12-11 | 2019-12-28 | 3.4 | 3.61 | 3.06 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 12.32 | 0.00 | 2.075 | 7.70 | 0.00 | 4.1 | 95.9 | 0.0 | -3.36 | 0.63 | 0.73 | 1.41 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.86 | 0.00 | 1.358 | 10.76 | 0.24 | 4.5 | 95.5 | 0.0 | -0.23 | 0.53 | 0.62 | 0.75 | 1.21 | 7612 | 987 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6V4U | 21048 | 2022-12-11 | 2019-12-01 | 3.8 | 4.31 | — | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 9.64 | 0.00 | 2.273 | 4.54 | 0.00 | 6.1 | 93.9 | 0.0 | -3.58 | 0.73 | 0.61 | 1.20 | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 13.43 | 0.01 | 2.168 | 13.63 | 0.61 | 13.6 | 86.4 | 0.0 | -2.00 | 0.90 | 0.76 | 0.68 | 1.46 | 7074 | 1106 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TEA | 10478 | 2022-12-15 | 2019-11-11 | 3.89 | 4.22 | — | 4.0 | 0.008 | 1.34 | 0.0 | 0.08 | 12.64 | 0.01 | 2.273 | 14.75 | 0.00 | 11.9 | 88.1 | 0.0 | -4.86 | 0.89 | 0.84 | 1.48 | 3.9 | 0.006 | 1.02 | 0.0 | 0.05 | 16.92 | 0.00 | 2.081 | 35.51 | 2.19 | 9.0 | 91.0 | 0.0 | -3.02 | 1.03 | 0.91 | 0.87 | 1.48 | 23328 | 3120 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LHV | 0900 | 2022-12-13 | 2019-12-10 | 4.59 | 4.86 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 5.37 | 0.00 | 1.654 | 9.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.59 | — | 4.4 | 0.009 | 1.36 | 0.0 | 0.05 | 6.54 | 0.00 | 2.055 | 51.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.58 | 0.84 | 0.81 | — | 8456 | 0 | 3 | 0 | 1707 | 0 | 0 | logfile |
✔ | 6YTQ | 10921 | 2022-12-21 | 2020-04-24 | 4.02 | 4.09 | 3.98 | 4.0 | 0.006 | 0.68 | 0.0 | 0.04 | 13.94 | 0.00 | 2.345 | 6.64 | 0.00 | 3.3 | 96.7 | 0.0 | -0.58 | 0.68 | 0.83 | — | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 13.87 | 0.00 | 2.183 | 7.23 | 0.04 | 3.0 | 97.0 | 0.0 | 2.84 | 2.00 | 0.66 | 0.82 | — | 45782 | 5874 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VN7 | 21249 | 2022-12-12 | 2020-01-29 | 3.2 | 3.53 | — | 3.7 | 0.004 | 0.90 | 0.0 | 0.07 | 8.54 | 0.01 | 2.254 | 4.34 | 0.00 | 2.8 | 97.2 | 0.0 | -2.38 | 0.66 | 0.78 | 2.53 | 3.7 | 0.002 | 0.54 | 0.0 | 0.04 | 14.13 | 0.00 | 2.153 | 7.52 | 0.33 | 2.1 | 97.9 | 0.0 | 1.31 | 0.74 | 0.56 | 0.73 | 1.57 | 8620 | 1052 | 7 | 0 | 10 | 0 | 0 | logfile |