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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7F6V | 31482 | 2023-04-20 | 2021-06-25 | 3.66 | 4.27 | — | 4.2 | 0.005 | 0.77 | 0.0 | 0.05 | 14.14 | 0.00 | 2.356 | 10.62 | 0.00 | 6.8 | 93.2 | 0.0 | 0.27 | 0.60 | 0.78 | 1.08 | 4.2 | 0.003 | 0.65 | 0.0 | 0.03 | 17.58 | 0.00 | 2.249 | 9.40 | 0.18 | 4.4 | 95.6 | 0.0 | 4.28 | 0.84 | 0.60 | 0.77 | 0.75 | 5314 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7URE | 26710 | 2023-04-20 | 2022-04-21 | 3.19 | 3.51 | 3.25 | 3.4 | 0.017 | 0.78 | 0.0 | 0.78 | 14.25 | 0.00 | 2.118 | 9.65 | 0.00 | 5.7 | 94.3 | 0.0 | -2.27 | 0.60 | 0.85 | 3.70 | 3.4 | 0.002 | 1.07 | 0.0 | 0.12 | 15.47 | 0.00 | 2.071 | 5.85 | 0.69 | 3.8 | 96.2 | 0.0 | 0.79 | 0.93 | 0.59 | 0.85 | 3.00 | 5450 | 678 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7RXC | 24728 | 2023-04-21 | 2021-08-22 | 3.2 | 2.84 | — | 3.2 | 0.006 | 0.77 | 0.0 | 0.13 | 14.32 | 0.01 | 2.089 | 9.58 | 0.00 | 2.3 | 97.7 | 0.0 | 1.18 | 0.66 | 0.79 | 2.95 | 3.2 | 0.005 | 0.61 | 0.0 | 0.04 | 15.95 | 0.00 | 2.147 | 9.90 | 0.50 | 3.0 | 97.0 | 0.0 | 0.93 | 0.36 | 0.67 | 0.84 | 2.67 | 9360 | 1178 | 7 | 0 | 6 | 0 | 0 | logfile |
✔ | 6VN7 | 21249 | 2023-04-20 | 2020-01-29 | 3.2 | 3.53 | — | 3.7 | 0.004 | 0.90 | 0.0 | 0.07 | 8.54 | 0.01 | 2.254 | 4.22 | 0.00 | 2.8 | 97.2 | 0.0 | -2.38 | 0.66 | 0.78 | 2.53 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 14.31 | 0.00 | 2.106 | 8.15 | 0.44 | 2.3 | 97.7 | 0.0 | 0.87 | 0.75 | 0.56 | 0.74 | 2.05 | 8620 | 1052 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 7CR7 | 30448 | 2023-04-23 | 2020-08-12 | 3.7 | 3.92 | — | 3.8 | 0.008 | 0.79 | 0.0 | 0.04 | 14.63 | 0.00 | 1.825 | 92.66 | 0.00 | 5.6 | 94.2 | 0.2 | -3.89 | 0.64 | 0.69 | 0.59 | 3.8 | 0.004 | 0.90 | 0.0 | 0.04 | 17.53 | 0.00 | 2.011 | 22.09 | 0.59 | 4.2 | 95.8 | 0.0 | -0.01 | 1.52 | 0.63 | 0.70 | 0.45 | 16136 | 1988 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 6oCE | 20017 | 2023-04-22 | 2019-03-23 | 4.9 | 4.11 | — | 4.0 | 0.006 | 0.73 | 0.0 | 0.04 | 8.07 | 0.01 | 1.868 | 8.56 | 0.00 | 9.9 | 90.1 | 0.0 | -4.37 | 0.45 | 0.60 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 12.52 | 0.01 | 2.176 | 12.97 | 0.00 | 12.3 | 87.7 | 0.0 | -2.82 | 1.19 | 0.46 | 0.63 | — | 11228 | 1378 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CSZ | 26976 | 2023-04-21 | 2022-05-13 | 3.2 | 3.55 | 3.13 | 3.3 | 0.005 | 0.67 | 0.0 | 0.04 | 19.39 | 0.00 | 1.962 | 11.72 | 0.00 | 4.9 | 95.1 | 0.0 | -0.97 | 0.84 | 0.86 | 4.03 | 3.3 | 0.004 | 0.57 | 0.0 | 0.03 | 19.22 | 0.00 | 1.980 | 9.85 | 0.24 | 4.9 | 95.1 | 0.0 | -0.14 | 1.12 | 0.84 | 0.88 | 3.57 | 8948 | 494 | 5 | 236 | 3 | 0 | 0 | logfile |
✔ | 6ZY7 | 11553 | 2023-04-25 | 2020-07-30 | 4.64 | 8.26 | 4.84 | 4.6 | 0.009 | 1.01 | 0.0 | 0.08 | 12.28 | 0.01 | 2.218 | 6.54 | 0.00 | 1.7 | 98.3 | 0.0 | -1.71 | 0.93 | 0.83 | — | 4.6 | 0.002 | 0.57 | 0.0 | 0.04 | 13.75 | 0.00 | 2.166 | 14.32 | 0.00 | 2.3 | 97.7 | 0.0 | -0.31 | 2.28 | 0.92 | 0.71 | — | 19979 | 2319 | 10 | 60 | 4 | 0 | 0 | logfile |
✔ | 7KVC | 23046 | 2023-04-26 | 2020-11-27 | 4.7 | 4.90 | — | 4.8 | 0.005 | 0.84 | 0.0 | 0.05 | 13.91 | 0.00 | 2.224 | 33.61 | 0.00 | 10.7 | 89.3 | 0.0 | -2.46 | 0.82 | 0.81 | — | 4.8 | 0.004 | 0.76 | 0.0 | 0.04 | 14.05 | 0.01 | 2.222 | 24.53 | 0.00 | 5.6 | 94.4 | 0.0 | -0.15 | 0.55 | 0.81 | 0.79 | — | 21920 | 2660 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TRY | 26103 | 2023-04-20 | 2022-01-31 | 3.7 | 4.15 | — | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 7.34 | 0.01 | 2.261 | 3.44 | 0.00 | 1.7 | 98.3 | 0.0 | 1.03 | 0.67 | 0.74 | 1.05 | 4.0 | 0.004 | 0.79 | 0.0 | 0.05 | 14.01 | 0.00 | 2.080 | 16.89 | 0.74 | 3.3 | 96.7 | 0.0 | 1.27 | 2.53 | 0.69 | 0.79 | 0.74 | 8340 | 1211 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T9o | 10419 | 2023-04-24 | 2019-10-28 | 3.39 | 3.51 | 3.38 | 3.5 | 0.010 | 1.01 | 0.0 | 0.07 | 10.82 | 0.01 | 2.200 | 3.72 | 0.00 | 6.7 | 92.7 | 0.6 | -3.77 | 0.66 | 0.86 | 3.99 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.31 | 0.00 | 2.082 | 6.65 | 0.36 | 2.3 | 97.5 | 0.2 | 0.74 | 0.56 | 0.68 | 0.89 | 2.90 | 16481 | 1924 | 12 | 0 | 41 | 0 | 0 | logfile |
✔ | 7WKW | 32570 | 2023-04-22 | 2022-01-11 | 2.62 | 2.71 | — | 2.8 | 0.003 | 0.99 | 0.0 | 0.04 | 12.85 | 0.00 | 1.991 | 5.89 | 0.00 | 1.9 | 98.1 | 0.0 | 1.70 | 0.47 | 0.63 | 1.09 | 2.7 | 0.002 | 0.57 | 0.0 | 0.04 | 15.64 | 0.00 | 1.923 | 4.64 | 1.10 | 1.6 | 98.4 | 0.0 | 1.88 | 0.60 | 0.60 | 0.82 | 2.26 | 12056 | 754 | 4 | 0 | 2 | 0 | 6138 | logfile |
✘ | 7SWP | 25478 | 2023-04-20 | 2021-11-20 | 3.8 | 3.74 | — | 4.0 | 0.008 | 0.92 | 0.0 | 0.05 | 12.87 | 0.01 | 2.202 | 40.14 | 0.00 | 12.1 | 87.9 | 0.0 | -2.17 | 0.51 | 0.71 | 1.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3372 | 436 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F7Q | 28907 | 2023-04-22 | 2022-11-20 | 3.22 | 3.34 | 3.24 | 3.4 | 0.004 | 0.87 | 0.0 | 0.07 | 8.03 | 0.01 | 2.262 | 3.31 | 0.00 | 1.4 | 98.6 | 0.0 | 0.89 | 0.64 | 0.78 | 2.57 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 12.74 | 0.00 | 2.135 | 5.66 | 0.23 | 1.8 | 98.2 | 0.0 | 2.02 | 0.66 | 0.64 | 0.83 | 2.76 | 11994 | 1484 | 11 | 0 | 10 | 0 | 0 | logfile |
✘ | 7UAE | 26422 | 2023-04-20 | 2022-03-12 | 2.6 | 2.71 | 2.62 | 2.3 | 0.012 | 1.76 | 2.0 | 0.10 | 12.76 | 0.02 | 2.282 | 0.11 | 0.00 | 3.9 | 96.1 | 0.0 | -0.18 | 0.66 | 0.87 | 6.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4513 | 535 | 7 | 0 | 18 | 0 | 0 | logfile |
✔ | 3JAE | 6345 | 2023-04-22 | 2015-06-08 | 3.9 | 2.88 | — | 3.5 | 0.006 | 1.26 | 0.0 | 0.05 | 9.27 | 0.01 | 2.202 | 13.69 | 0.00 | 0.9 | 99.1 | 0.0 | -1.69 | 0.70 | 0.74 | 1.87 | 3.2 | 0.003 | 0.87 | 0.0 | 0.04 | 13.61 | 0.00 | 2.157 | 15.62 | 0.16 | 2.8 | 97.2 | 0.0 | 0.08 | 1.49 | 0.72 | 0.82 | 1.59 | 12825 | 1690 | 10 | 0 | 10 | 0 | 0 | logfile |
✘ | 7oE7 | 12861 | 2023-04-22 | 2021-05-01 | 3.73 | 3.95 | 3.97 | 3.7 | 0.002 | 0.53 | 0.0 | 0.04 | 14.33 | 0.00 | 2.084 | 3.86 | 0.00 | 6.8 | 93.2 | 0.0 | -1.48 | 0.79 | 0.64 | 0.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11116 | 1382 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6ZQA | 11357 | 2023-04-26 | 2020-07-09 | 4.4 | 4.48 | — | 4.4 | 0.006 | 1.11 | 1.0 | 0.06 | 14.62 | 0.01 | 1.928 | 5.28 | 0.00 | 9.3 | 90.4 | 0.3 | -3.27 | 0.77 | 0.74 | — | 4.4 | 0.011 | 1.41 | 0.0 | 0.06 | 16.91 | 0.01 | 1.638 | 24.83 | 0.00 | 20.3 | 79.5 | 0.2 | -3.96 | 1.34 | 0.76 | 0.75 | — | 125991 | 19047 | 63 | 1485 | 5 | 0 | 0 | logfile |
✔ | 8EQ4 | 28535 | 2023-04-20 | 2022-10-07 | 2.71 | 3.56 | 2.72 | 3.3 | 0.006 | 0.74 | 0.0 | 0.05 | 12.21 | 0.02 | 2.233 | 7.56 | 0.00 | 1.1 | 98.9 | 0.0 | 1.28 | 0.68 | 0.87 | 4.24 | 3.3 | 0.005 | 0.63 | 0.0 | 0.05 | 14.50 | 0.00 | 2.271 | 7.70 | 1.44 | 1.8 | 98.2 | 0.0 | 1.32 | 1.29 | 0.68 | 0.87 | 4.36 | 6903 | 849 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7RYP | 24744 | 2023-04-22 | 2021-08-25 | 4.8 | 5.38 | 4.84 | 6.5 | 0.015 | 1.50 | 0.0 | 0.07 | 10.94 | 0.01 | 2.098 | 4.80 | 0.00 | 6.2 | 92.1 | 1.7 | -1.44 | 0.78 | 0.73 | — | 6.6 | 0.002 | 0.60 | 0.0 | 0.04 | 12.79 | 0.00 | 1.890 | 10.59 | 0.00 | 9.8 | 90.1 | 0.1 | -0.44 | 1.01 | 0.77 | 0.71 | — | 11293 | 725 | 2 | 0 | 0 | 0 | 5599 | logfile |