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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DA4 | 30622 | 2022-04-04 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.95 | 0.0 | 0.04 | 11.56 | 0.00 | 2.266 | 19.19 | 0.00 | 18.3 | 81.7 | 0.0 | -5.96 | 3.11 | 0.36 | 0.58 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2022-04-05 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.009 | 1.92 | 0.0 | 0.12 | 17.49 | 0.02 | 2.155 | 110.36 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.95 | 0.0 | 0.05 | 17.92 | 0.01 | 1.899 | 74.77 | 1.47 | 22.8 | 73.8 | 3.4 | -4.64 | 0.91 | 0.39 | 0.73 | 1.07 | 9890 | 1134 | 6 | 0 | 6 | 0 | 1086 | logfile |
✔ | 5A9Z | 6396 | 2022-04-13 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 23.31 | 0.03 | 0.000 | 199.39 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | 4.7 | 0.007 | 1.03 | 0.0 | 0.05 | 19.42 | 0.01 | 0.000 | 40.39 | 0.19 | 21.0 | 76.7 | 2.4 | -4.44 | 2.93 | 0.87 | 0.82 | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2022-04-04 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.73 | 0.0 | 0.05 | 17.17 | 0.00 | 2.189 | 18.36 | 0.00 | 23.2 | 76.8 | 0.0 | -5.96 | 1.50 | 0.41 | 0.75 | 2.79 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oHF | 12901 | 2022-04-08 | 2021-05-10 | 3.0 | 3.29 | 3.12 | 3.4 | 0.008 | 0.89 | 0.0 | 0.05 | 9.77 | 0.01 | 2.144 | 2.67 | 0.00 | 0.6 | 99.4 | 0.0 | -7.39 | 0.64 | 0.80 | 4.20 | 3.4 | 0.002 | 0.60 | 0.0 | 0.04 | 15.45 | 0.00 | 2.127 | 8.32 | 0.12 | 0.0 | 100.0 | 0.0 | -0.18 | 1.61 | 0.63 | 0.82 | 2.79 | 33576 | 4056 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CYE | 30498 | 2022-04-04 | 2020-09-03 | 3.54 | 3.31 | — | 3.7 | 0.010 | 1.42 | 0.0 | 0.07 | 12.31 | 0.01 | 2.232 | 4.09 | 1.30 | 12.4 | 87.0 | 0.6 | -7.38 | 0.56 | 0.76 | 2.20 | 3.7 | 0.004 | 0.93 | 0.0 | 0.04 | 15.06 | 0.01 | 2.103 | 6.64 | 0.52 | 10.1 | 89.9 | 0.0 | -2.70 | 0.86 | 0.59 | 0.81 | 2.03 | 7263 | 978 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BSP | 30163 | 2022-04-05 | 2020-03-31 | 4.0 | 4.12 | — | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 14.29 | 0.01 | 1.928 | 53.84 | 0.00 | 14.6 | 85.4 | 0.0 | -7.27 | 0.68 | 0.87 | — | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 16.45 | 0.00 | 2.163 | 13.15 | 0.42 | 7.5 | 92.5 | 0.0 | -2.51 | 0.63 | 0.68 | 0.86 | — | 11010 | 1352 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2022-04-05 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.08 | 0.01 | 1.607 | 79.24 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.0 | 0.005 | 0.92 | 0.0 | 0.04 | 20.49 | 0.01 | 2.171 | 17.24 | 1.07 | 8.0 | 90.2 | 1.8 | -2.96 | 1.27 | 0.55 | 0.79 | 2.24 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 6N1H | 8902 | 2022-04-05 | 2018-11-08 | 3.17 | 3.22 | — | 3.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.23 | 0.01 | 0.657 | 31.06 | 3.97 | 7.4 | 92.6 | 0.0 | -7.22 | 0.39 | 0.46 | 0.05 | 3.2 | 0.003 | 0.71 | 0.0 | 0.04 | 17.49 | 0.01 | 2.165 | 9.68 | 2.87 | 6.3 | 93.7 | 0.0 | 1.26 | 2.37 | 0.62 | 0.83 | 1.74 | 10991 | 1328 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 7D61 | 30587 | 2022-04-07 | 2020-09-28 | 2.8 | 2.98 | — | 3.0 | 0.003 | 0.77 | 0.0 | 0.04 | 16.27 | 0.01 | 2.340 | 1.83 | 0.00 | 2.4 | 97.6 | 0.0 | -7.13 | 0.69 | 0.82 | 2.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26664 | 3168 | 22 | 0 | 55 | 0 | 0 | logfile |
✔ | 6o9J | 0661 | 2022-04-09 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 17.39 | 0.01 | 0.154 | 55.29 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.011 | 1.09 | 10.0 | 0.05 | 17.02 | 0.01 | 1.293 | 32.70 | 0.58 | 23.4 | 73.7 | 3.0 | -4.89 | 1.14 | 0.79 | 0.75 | 0.36 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2022-04-04 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 10.0 | 0.003 | 0.66 | 0.0 | 0.03 | 16.23 | 0.00 | 2.422 | 6.03 | 0.00 | 3.9 | 96.1 | 0.0 | -0.32 | 1.40 | 0.27 | 0.03 | -0.67 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6HQE | 0252 | 2022-04-04 | 2018-09-24 | 4.4 | 4.34 | — | 4.4 | 0.009 | 1.25 | 0.0 | 0.06 | 9.67 | 0.01 | 2.307 | 6.79 | 0.00 | 4.8 | 95.2 | 0.0 | -7.05 | 0.65 | 0.85 | — | 4.4 | 0.004 | 0.74 | 0.0 | 0.04 | 12.12 | 0.01 | 2.264 | 19.28 | 0.00 | 2.6 | 97.4 | 0.0 | 1.06 | 1.03 | 0.65 | 0.84 | — | 9360 | 1196 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TUP | 10593 | 2022-04-06 | 2020-01-08 | 3.2 | 3.52 | — | 3.3 | 0.011 | 1.02 | 0.0 | 0.05 | 21.23 | 0.00 | 0.032 | 54.60 | 0.00 | 0.0 | 100.0 | 0.0 | -7.04 | 0.49 | 0.47 | 1.19 | 3.6 | 0.039 | 2.56 | 0.0 | 0.24 | 27.07 | 0.01 | 1.098 | 116.88 | 1.25 | 3.2 | 96.8 | 0.0 | -2.76 | 8.49 | 0.55 | 0.60 | -0.09 | 22400 | 2300 | 100 | 300 | 0 | 0 | 0 | logfile |
✘ | 7D65 | 30589 | 2022-04-07 | 2020-09-29 | 2.94 | 3.09 | — | 3.2 | 0.008 | 0.94 | 0.0 | 0.05 | 16.49 | 0.01 | 2.328 | 1.94 | 0.14 | 4.3 | 95.7 | 0.0 | -7.00 | 0.66 | 0.81 | 2.37 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26664 | 3168 | 22 | 0 | 55 | 0 | 0 | logfile |
✔ | 7D60 | 30586 | 2022-04-07 | 2020-09-28 | 2.61 | 2.73 | — | 2.7 | 0.006 | 0.89 | 0.0 | 0.05 | 16.44 | 0.01 | 2.395 | 1.56 | 0.00 | 2.1 | 97.9 | 0.0 | -6.95 | 0.70 | 0.83 | 2.76 | 2.7 | 0.002 | 0.59 | 0.0 | 0.03 | 17.57 | 0.00 | 2.200 | 4.01 | 1.79 | 2.5 | 97.5 | 0.0 | 1.45 | 0.54 | 0.69 | 0.83 | 2.00 | 26664 | 3168 | 22 | 0 | 55 | 0 | 0 | logfile |
✔ | 6PW5 | 20499 | 2022-04-07 | 2019-07-22 | 3.45 | 3.53 | — | 3.5 | 0.013 | 1.39 | 0.0 | 0.07 | 14.34 | 0.01 | 2.327 | 4.38 | 1.61 | 11.6 | 87.6 | 0.8 | -6.95 | 0.76 | 0.85 | 3.30 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 15.91 | 0.00 | 2.142 | 8.38 | 0.31 | 8.2 | 91.5 | 0.3 | -0.48 | 0.71 | 0.75 | 0.85 | 1.69 | 24740 | 3032 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6RoW | 4975 | 2022-04-09 | 2019-05-13 | 4.5 | 4.52 | 4.16 | 4.2 | 0.016 | 1.50 | 0.0 | 0.07 | 14.46 | 0.01 | 1.848 | 49.47 | 0.00 | 30.3 | 68.7 | 1.0 | -6.95 | 0.81 | 0.74 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 13.72 | 0.00 | 1.972 | 11.87 | 0.00 | 13.1 | 86.7 | 0.1 | -2.58 | 1.49 | 0.81 | 0.73 | — | 43049 | 3129 | 7 | 0 | 0 | 0 | 20156 | logfile |
✔ | 6PW4 | 20498 | 2022-04-06 | 2019-07-22 | 3.53 | 3.64 | — | 3.6 | 0.008 | 1.14 | 0.0 | 0.05 | 16.95 | 0.01 | 2.302 | 5.63 | 0.38 | 10.7 | 89.3 | 0.1 | -6.92 | 0.71 | 0.80 | 1.68 | 3.6 | 0.010 | 1.06 | 1.0 | 0.04 | 17.58 | 0.01 | 1.703 | 15.42 | 0.17 | 9.9 | 90.0 | 0.1 | -2.16 | 0.53 | 0.70 | 0.79 | 1.19 | 22348 | 2742 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 6GGS | 4399 | 2022-04-04 | 2018-05-03 | 3.94 | 3.85 | — | 3.8 | 0.006 | 1.15 | 0.0 | 0.07 | 14.10 | 0.00 | 2.060 | 14.46 | 1.27 | 4.8 | 95.2 | 0.0 | -6.91 | 0.49 | 0.77 | 1.98 | 3.8 | 0.005 | 1.14 | 0.0 | 0.05 | 17.31 | 0.00 | 2.083 | 29.21 | 0.63 | 3.8 | 96.2 | 0.0 | -2.89 | 3.54 | 0.51 | 0.77 | 2.06 | 6880 | 860 | 10 | 0 | 0 | 0 | 0 | logfile |