The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LZ3 | 30022 | 2023-08-14 | 2020-02-18 | 3.2 | 3.37 | 3.26 | 3.3 | 0.007 | 1.20 | 0.0 | 0.06 | 16.42 | 0.01 | 2.201 | 4.66 | 3.86 | 8.7 | 90.9 | 0.4 | -6.45 | 0.80 | 0.81 | 2.16 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.09 | 0.00 | 2.134 | 9.41 | 0.30 | 7.2 | 92.8 | 0.0 | -1.94 | 0.68 | 0.80 | 0.83 | 2.69 | 15968 | 1944 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7ALW | 11820 | 2023-08-27 | 2020-10-07 | 3.7 | 3.77 | 3.62 | 3.7 | 0.010 | 0.96 | 0.0 | 0.05 | 15.64 | 0.00 | 2.150 | 15.88 | 0.98 | 17.3 | 82.4 | 0.3 | -6.45 | 0.81 | 0.86 | 2.68 | 3.7 | 0.003 | 0.77 | 0.0 | 0.05 | 17.83 | 0.00 | 2.195 | 13.13 | 0.27 | 10.5 | 89.2 | 0.3 | -2.80 | 1.01 | 0.79 | 0.84 | 1.53 | 50148 | 6192 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E1A | 30938 | 2023-08-11 | 2021-02-01 | 3.66 | 4.00 | — | 3.9 | 0.012 | 1.39 | 0.0 | 0.07 | 13.29 | 0.01 | 2.233 | 7.56 | 0.81 | 11.6 | 88.3 | 0.1 | -6.43 | 0.63 | 0.78 | 1.89 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 15.83 | 0.00 | 2.156 | 10.94 | 0.81 | 6.8 | 93.2 | 0.0 | -3.36 | 1.35 | 0.63 | 0.78 | 1.26 | 9284 | 1189 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6VXH | 21437 | 2023-08-10 | 2020-02-21 | 4.0 | 4.27 | — | 4.2 | 0.006 | 1.07 | 0.0 | 0.06 | 15.59 | 0.01 | 2.245 | 5.74 | 0.31 | 9.9 | 89.9 | 0.2 | -6.42 | 0.65 | 0.82 | — | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 16.99 | 0.00 | 2.180 | 9.97 | 0.21 | 7.6 | 92.4 | 0.0 | -2.65 | 0.61 | 0.64 | 0.81 | — | 8879 | 1130 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 8SiA | 40504 | 2023-08-19 | 2023-04-14 | 2.91 | 3.13 | 3.00 | 3.1 | 0.013 | 1.25 | 0.0 | 0.09 | 18.89 | 0.01 | 1.993 | 5.03 | 0.72 | 14.5 | 85.0 | 0.5 | -6.42 | 0.61 | 0.69 | 3.40 | 3.1 | 0.004 | 0.74 | 2.0 | 0.10 | 18.01 | 0.00 | 2.007 | 20.18 | 1.79 | 12.1 | 87.8 | 0.2 | -2.66 | 1.22 | 0.63 | 0.77 | 2.89 | 74681 | 4420 | 8 | 0 | 65 | 0 | 36144 | logfile |
✔ | 6A70 | 6991 | 2023-08-13 | 2018-06-29 | 3.6 | 4.21 | — | 3.7 | 0.009 | 1.20 | 0.0 | 0.06 | 12.37 | 0.01 | 2.200 | 4.77 | 1.28 | 9.2 | 90.7 | 0.1 | -6.41 | 0.52 | 0.57 | 0.70 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 14.75 | 0.00 | 2.095 | 13.74 | 0.53 | 8.3 | 91.7 | 0.0 | -1.40 | 1.21 | 0.58 | 0.73 | 0.81 | 15142 | 2086 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SHN | 25131 | 2023-08-11 | 2021-10-09 | 3.1 | 3.32 | — | 3.3 | 0.017 | 1.35 | 6.0 | 0.08 | 16.18 | 0.01 | 2.330 | 8.40 | 0.20 | 3.5 | 96.5 | 0.0 | -6.40 | 0.65 | 0.84 | 2.48 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 16.57 | 0.00 | 2.146 | 10.22 | 0.30 | 3.5 | 96.5 | 0.0 | 0.15 | 0.64 | 0.63 | 0.84 | 1.45 | 9677 | 1171 | 4 | 0 | 44 | 0 | 0 | logfile |
✔ | 6LTN | 0975 | 2023-08-13 | 2020-01-23 | 3.1 | 3.48 | 3.04 | 3.5 | 0.006 | 0.95 | 0.0 | 0.05 | 16.29 | 0.01 | 2.254 | 2.43 | 1.38 | 4.7 | 95.3 | 0.0 | -6.39 | 0.65 | 0.79 | 2.98 | 3.4 | 0.003 | 0.71 | 0.0 | 0.04 | 17.09 | 0.01 | 2.224 | 7.90 | 0.07 | 3.8 | 96.2 | 0.0 | 0.14 | 1.65 | 0.65 | 0.80 | 3.05 | 13615 | 1708 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RBG | 4798 | 2023-08-15 | 2019-04-10 | 3.0 | 3.55 | — | 3.4 | 0.004 | 0.89 | 0.0 | 0.05 | 14.50 | 0.00 | 2.407 | 3.44 | 0.38 | 2.0 | 98.0 | 0.0 | -6.39 | 0.67 | 0.80 | 3.37 | 3.4 | 0.002 | 0.63 | 0.0 | 0.04 | 17.29 | 0.00 | 2.160 | 4.66 | 0.86 | 1.5 | 98.5 | 0.0 | 0.85 | 0.56 | 0.71 | 0.84 | 2.57 | 19336 | 2464 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N88 | 24233 | 2023-08-11 | 2021-06-14 | 3.7 | 3.90 | — | 3.9 | 0.008 | 1.04 | 0.0 | 0.05 | 15.40 | 0.01 | 1.680 | 28.91 | 0.81 | 21.4 | 78.3 | 0.2 | -6.39 | 0.74 | 0.73 | 1.71 | 3.9 | 0.004 | 0.84 | 0.0 | 0.05 | 16.61 | 0.01 | 1.920 | 18.60 | 0.81 | 13.5 | 86.5 | 0.0 | -3.78 | 1.20 | 0.73 | 0.71 | 1.51 | 9402 | 1220 | 2 | 0 | 4 | 0 | 0 | logfile |
✔ | 6A91 | 6996 | 2023-08-12 | 2018-07-11 | 3.2 | 3.32 | — | 3.3 | 0.009 | 1.14 | 0.0 | 0.06 | 12.46 | 0.01 | 2.238 | 6.00 | 1.22 | 7.8 | 91.6 | 0.6 | -6.38 | 0.60 | 0.82 | 4.21 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.44 | 0.00 | 2.182 | 5.64 | 0.44 | 7.2 | 92.6 | 0.1 | -1.04 | 0.73 | 0.65 | 0.86 | 2.56 | 11182 | 1380 | 6 | 0 | 10 | 3 | 0 | logfile |
✔ | 5TJ5 | 8409 | 2023-08-13 | 2016-10-03 | 3.9 | 4.19 | — | 4.1 | 0.010 | 1.29 | 0.0 | 0.05 | 9.13 | 0.01 | 1.040 | 27.77 | 0.12 | 14.4 | 85.2 | 0.4 | -6.37 | 0.62 | 0.69 | 1.87 | 4.1 | 0.004 | 0.89 | 0.0 | 0.04 | 12.82 | 0.00 | 2.018 | 15.16 | 1.10 | 6.4 | 93.3 | 0.2 | 0.39 | 1.76 | 0.63 | 0.74 | 1.06 | 14976 | 2102 | 14 | 0 | 365 | 0 | 0 | logfile |
✔ | 6M23 | 30061 | 2023-08-13 | 2020-02-26 | 3.2 | 3.49 | — | 3.3 | 0.010 | 1.12 | 0.0 | 0.07 | 14.88 | 0.01 | 2.216 | 8.07 | 2.32 | 10.7 | 87.8 | 1.5 | -6.36 | 0.68 | 0.79 | 2.75 | 3.4 | 0.003 | 0.77 | 0.0 | 0.04 | 15.78 | 0.00 | 2.138 | 7.67 | 0.13 | 10.3 | 89.2 | 0.4 | -1.39 | 0.76 | 0.67 | 0.83 | 2.18 | 14744 | 1872 | 12 | 0 | 18 | 2 | 0 | logfile |
✔ | 6MUP | 9251 | 2023-08-14 | 2018-10-23 | 3.5 | 3.90 | — | 3.8 | 0.013 | 1.19 | 1.0 | 0.06 | 25.79 | 0.01 | 1.379 | 7.59 | 1.08 | 10.3 | 89.2 | 0.5 | -6.36 | 0.61 | 0.61 | 2.67 | 3.8 | 0.004 | 0.69 | 0.0 | 0.04 | 26.80 | 0.00 | 2.109 | 12.88 | 0.49 | 8.9 | 91.1 | 0.0 | -2.12 | 0.77 | 0.75 | 0.79 | 1.74 | 15803 | 1224 | 14 | 294 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2023-08-09 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.18 | 0.0 | 0.04 | 10.31 | 0.00 | 2.148 | 15.12 | 0.00 | 32.0 | 68.0 | 0.0 | -5.66 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WUN | 21917 | 2023-08-11 | 2020-05-04 | 3.9 | 4.00 | — | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 13.70 | 0.00 | 2.166 | 14.26 | 1.14 | 18.4 | 81.6 | 0.0 | -6.35 | 0.68 | 0.80 | 1.75 | 3.9 | 0.005 | 0.78 | 0.0 | 0.04 | 14.77 | 0.00 | 2.028 | 12.03 | 0.38 | 16.1 | 83.8 | 0.1 | -3.62 | 0.57 | 0.68 | 0.80 | 1.47 | 10082 | 1326 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6NEF | 9357 | 2023-08-20 | 2018-12-17 | 3.4 | 3.55 | — | 3.5 | 0.021 | 1.83 | 0.0 | 0.07 | 16.56 | 0.01 | 1.696 | 41.21 | 0.04 | 24.1 | 72.2 | 3.7 | -6.35 | 0.42 | 0.36 | 0.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29457 | 3663 | 9 | 0 | 63 | 0 | 0 | logfile |
✔ | 6YKR | 10830 | 2023-08-11 | 2020-04-06 | 3.0 | 3.10 | 2.86 | 3.1 | 0.004 | 0.84 | 0.0 | 0.05 | 9.41 | 0.01 | 2.314 | 2.33 | 0.00 | 2.6 | 97.4 | 0.0 | -6.35 | 0.66 | 0.85 | 5.11 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 16.02 | 0.00 | 2.274 | 7.67 | 1.02 | 2.4 | 97.6 | 0.0 | 1.06 | 1.15 | 0.67 | 0.88 | 3.55 | 10189 | 1326 | 9 | 0 | 0 | 6 | 0 | logfile |
✔ | 6LR0 | 31583 | 2023-08-11 | 2020-01-15 | 3.5 | 3.87 | — | 3.8 | 0.011 | 1.38 | 0.0 | 0.07 | 13.07 | 0.01 | 2.291 | 5.77 | 0.88 | 11.0 | 88.9 | 0.1 | -6.35 | 0.66 | 0.78 | 1.71 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 15.43 | 0.00 | 2.162 | 9.47 | 0.39 | 6.5 | 93.5 | 0.0 | -3.41 | 0.84 | 0.64 | 0.75 | 0.73 | 9576 | 1230 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CAL | 30334 | 2023-08-13 | 2020-06-09 | 3.2 | 3.36 | — | 3.3 | 0.007 | 1.09 | 0.0 | 0.06 | 14.52 | 0.01 | 2.265 | 2.29 | 0.00 | 14.0 | 85.7 | 0.2 | -6.34 | 0.71 | 0.82 | 3.61 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 15.59 | 0.00 | 2.257 | 6.17 | 0.93 | 10.6 | 89.1 | 0.2 | -1.85 | 1.50 | 0.70 | 0.82 | 2.65 | 14064 | 1776 | 8 | 0 | 4 | 0 | 0 | logfile |