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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6UXB | 20932 | 2024-09-25 | 2019-11-07 | 4.9 | 5.50 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.627 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.74 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RB9 | 4789 | 2024-09-26 | 2019-04-09 | 3.2 | 3.30 | 3.19 | 3.2 | 0.010 | 0.82 | 0.0 | 0.05 | 13.72 | 0.00 | 2.049 | 17.66 | 1.42 | 15.9 | 84.1 | 0.0 | -5.55 | 0.79 | 0.84 | 3.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13391 | 1736 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 7MTS | 23996 | 2024-09-27 | 2021-05-13 | 3.2 | 3.09 | — | 3.0 | 0.007 | 0.77 | 0.0 | 0.05 | 13.16 | 0.01 | 2.213 | 4.48 | 0.13 | 3.1 | 96.9 | 0.0 | 0.41 | 0.83 | 0.84 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16068 | 2150 | 8 | 0 | 3 | 0 | 0 | logfile |
✘ | 6ZB5 | 11145 | 2024-09-30 | 2020-06-07 | 2.85 | 2.93 | 2.86 | 2.9 | 0.009 | 0.77 | 1.0 | 0.06 | 18.16 | 0.01 | 1.985 | 2.81 | 3.76 | 7.6 | 92.4 | 0.0 | -3.22 | 0.77 | 0.85 | 3.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24499 | 3096 | 9 | 0 | 29 | 0 | 0 | logfile |
✘ | 6UXA | 20931 | 2024-09-25 | 2019-11-07 | 4.5 | 5.05 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.628 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.71 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 7TC0 | 25803 | 2024-09-26 | 2021-12-22 | 3.1 | 3.02 | 2.78 | 3.2 | 0.003 | 0.59 | 3.0 | 0.04 | 15.73 | 0.01 | 1.817 | 8.24 | 2.49 | 4.1 | 95.9 | 0.0 | -1.78 | 0.74 | 0.81 | 1.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13809 | 1781 | 4 | 0 | 11 | 0 | 0 | logfile |
✘ | 7RZW | 24780 | 2024-09-26 | 2021-08-27 | 3.3 | 3.02 | 3.30 | 3.3 | 0.006 | 1.01 | 0.0 | 0.06 | 15.42 | 0.01 | 2.321 | 7.55 | 0.88 | 5.8 | 94.2 | 0.0 | -2.54 | 0.75 | 0.75 | 1.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13616 | 1723 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 7KDP | 22828 | 2024-09-27 | 2020-10-09 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15844 | 1914 | 6 | 0 | 34 | 0 | 0 | logfile |
✘ | 7BW4 | 30226 | 2024-09-24 | 2020-04-13 | 3.7 | 3.92 | — | 3.8 | 0.004 | 0.66 | 1.0 | 0.05 | 15.16 | 0.00 | 2.078 | 16.25 | 1.68 | 4.3 | 95.5 | 0.2 | -2.50 | 0.77 | 0.77 | 1.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8605 | 1078 | 5 | 0 | 2 | 0 | 0 | logfile |
✘ | 7LYT | 23601 | 2024-09-27 | 2021-03-08 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14354 | 712 | 6 | 92 | 6 | 0 | 6722 | logfile |
✘ | 7SMS | 25207 | 2024-09-28 | 2021-10-26 | 3.18 | 3.33 | — | 3.3 | 0.006 | 0.78 | 0.0 | 0.05 | 17.59 | 0.00 | 2.187 | 5.21 | 0.00 | 2.8 | 97.2 | 0.0 | 1.21 | 0.78 | 0.85 | 3.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17051 | 2015 | 15 | 0 | 32 | 0 | 0 | logfile |
✘ | 7XFM | 33176 | 2024-09-26 | 2022-04-01 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12914 | 946 | 11 | 266 | 0 | 0 | 0 | logfile |
✘ | 7NV0 | 12601 | 2024-09-25 | 2021-03-15 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9928 | 1180 | 7 | 53 | 1 | 0 | 0 | logfile |
✘ | 7XGY | 33189 | 2024-09-23 | 2022-04-07 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4555 | 574 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 6LBH | 0869 | 2024-09-25 | 2019-11-14 | 3.7 | 3.79 | — | 3.8 | 0.006 | 0.82 | 0.0 | 0.05 | 13.62 | 0.00 | 2.079 | 18.56 | 0.20 | 7.7 | 92.2 | 0.2 | -2.87 | 0.75 | 0.83 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9219 | 1236 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7U9P | 26404 | 2024-09-23 | 2022-03-11 | 3.5 | 3.18 | 3.38 | 3.4 | 0.013 | 1.18 | 0.0 | 0.07 | 10.40 | 0.01 | 2.304 | 2.58 | 0.15 | 11.6 | 88.2 | 0.3 | -4.34 | 0.69 | 0.84 | 4.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6126 | 773 | 6 | 0 | 4 | 0 | 0 | logfile |
✘ | 5AJ3 | 2913 | 2024-09-27 | 2015-02-20 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66363 | 4665 | 49 | 1102 | 1006 | 118 | 0 | logfile |
✘ | 6oMB | 20124 | 2024-09-29 | 2019-04-18 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21815 | 2775 | 11 | 0 | 48 | 0 | 0 | logfile |
✘ | 4V19 | 2787 | 2024-09-28 | 2014-09-25 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69409 | 4361 | 42 | 1583 | 171 | 204 | 0 | logfile |
✘ | 5X58 | 6703 | 2024-09-30 | 2017-02-15 | 3.2 | 3.40 | — | 3.4 | 0.007 | 1.17 | 0.0 | 0.07 | 14.96 | 0.01 | 2.011 | 5.28 | 0.44 | 9.2 | 90.8 | 0.0 | -4.64 | 0.68 | 0.79 | 2.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25265 | 3159 | 6 | 0 | 42 | 0 | 0 | logfile |