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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7ZZ2 | 15032 | 2024-01-17 | 2022-05-25 | 2.48 | 2.80 | 2.37 | 2.1 | 0.005 | 0.76 | 0.0 | 0.05 | 17.25 | 0.01 | 2.132 | 4.21 | 3.27 | 2.2 | 97.8 | 0.0 | -0.30 | 0.90 | 0.89 | 3.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4366 | 541 | 1 | 0 | 3 | 57 | 0 | logfile |
✘ | 5XNo | 6744 | 2024-01-19 | 2017-05-23 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10020 | 854 | 8 | 0 | 72 | 0 | 0 | logfile |
✘ | 7ZZ6 | 15036 | 2024-01-18 | 2022-05-25 | 2.15 | 2.39 | 2.12 | 2.1 | 0.006 | 0.68 | 0.0 | 0.04 | 17.30 | 0.00 | 1.385 | 8.71 | 3.48 | 2.9 | 97.1 | 0.0 | 0.64 | 0.91 | 0.90 | 4.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8257 | 1017 | 6 | 0 | 6 | 157 | 0 | logfile |
✘ | 7SRR | 25402 | 2024-01-19 | 2021-11-08 | 2.9 | 2.20 | — | 2.0 | 0.005 | 0.67 | 0.0 | 0.05 | 12.70 | 0.00 | 2.196 | 3.95 | 0.12 | 3.4 | 96.6 | 0.0 | 0.15 | 0.80 | 0.78 | 3.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8394 | 1119 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 7DBH | 30631 | 2024-01-19 | 2020-10-20 | 3.6 | 4.18 | — | 3.4 | 0.007 | 0.74 | 1.0 | 0.05 | 28.57 | 0.00 | 1.451 | 11.99 | 0.17 | 3.2 | 96.8 | 0.0 | 0.54 | 0.91 | 0.85 | 2.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10631 | 697 | 10 | 252 | 0 | 0 | 0 | logfile |
✘ | 7XTB | 33445 | 2024-01-18 | 2022-05-16 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8101 | 1037 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 6V4U | 21048 | 2024-01-18 | 2019-12-01 | 3.8 | 4.31 | — | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 9.64 | 0.00 | 2.273 | 4.54 | 0.00 | 6.1 | 93.9 | 0.0 | -3.58 | 0.73 | 0.61 | 1.20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7074 | 1106 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7EFD | 31084 | 2024-01-17 | 2021-03-21 | 1.77 | 1.78 | 1.82 | 1.9 | 0.033 | 3.16 | 12.0 | 0.09 | 15.32 | 0.02 | 0.001 | 1.61 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.74 | 0.82 | 5.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✘ | 7VG2 | 31963 | 2024-01-18 | 2021-09-14 | 3.1 | 2.73 | — | 3.0 | 0.016 | 1.43 | 1.0 | 0.09 | 15.76 | 0.01 | 1.822 | 17.56 | 1.74 | 8.0 | 91.8 | 0.2 | -3.84 | 0.72 | 0.79 | 3.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8203 | 845 | 4 | 71 | 3 | 0 | 0 | logfile |
✘ | 7R1D | 14239 | 2024-01-17 | 2022-02-02 | 3.5 | 3.51 | — | 3.5 | 0.005 | 0.80 | 0.0 | 0.05 | 13.61 | 0.01 | 2.097 | 17.88 | 0.00 | 7.1 | 92.9 | 0.0 | -1.31 | 0.77 | 0.79 | 2.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5183 | 653 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7JNA | 22403 | 2024-01-17 | 2020-08-04 | 3.6 | 3.74 | — | 3.8 | 0.005 | 0.72 | 0.0 | 0.05 | 12.95 | 0.03 | 2.215 | 12.10 | 0.00 | 4.3 | 95.7 | 0.0 | -3.83 | 0.63 | 0.71 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6432 | 834 | 9 | 0 | 15 | 0 | 0 | logfile |
✘ | 7XJi | 33228 | 2024-01-18 | 2022-04-18 | 3.9 | 3.60 | 3.70 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 13.92 | 0.00 | 2.165 | 9.02 | 0.00 | 4.3 | 95.7 | 0.0 | -0.25 | 0.61 | 0.78 | 2.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7851 | 1027 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 6VEF | 21156 | 2024-01-20 | 2019-12-31 | 4.08 | 4.14 | — | 4.1 | 0.009 | 1.19 | 0.0 | 0.07 | 11.76 | 0.01 | 1.866 | 12.07 | 0.00 | 10.4 | 89.5 | 0.1 | -4.48 | 0.77 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13414 | 1688 | 4 | 0 | 4 | 0 | 0 | logfile |
✘ | 7DXA | 30902 | 2024-01-20 | 2021-01-18 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15162 | 1629 | 23 | 0 | 50 | 0 | 0 | logfile |
✘ | 7VHP | 32002 | 2024-01-20 | 2021-09-22 | 3.27 | 3.30 | — | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 13.46 | 0.00 | 1.149 | 15.64 | 0.32 | 3.1 | 96.8 | 0.0 | 1.82 | 0.78 | 0.73 | 1.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66600 | 8304 | 48 | 0 | 0 | 0 | 0 | logfile |
✘ | 6WTi | 21897 | 2024-01-19 | 2020-05-02 | 2.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9980 | 1207 | 8 | 0 | 14 | 0 | 0 | logfile |
✘ | 8D64 | 27216 | 2024-01-19 | 2022-06-06 | 3.14 | 3.25 | 3.11 | 3.2 | 0.007 | 0.81 | 0.0 | 0.06 | 13.69 | 0.01 | 2.275 | 7.13 | 0.00 | 6.6 | 93.4 | 0.0 | -3.61 | 0.72 | 0.84 | 3.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12545 | 1540 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RAJ | 4777 | 2024-01-19 | 2019-04-06 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10198 | 1282 | 5 | 0 | 4 | 0 | 0 | logfile |
✘ | 7ZEB | 14688 | 2024-01-20 | 2022-03-30 | 3.8 | 3.81 | — | 3.7 | 0.004 | 0.85 | 0.0 | 1.03 | 16.92 | 0.01 | 2.202 | 5.98 | 0.46 | 3.8 | 96.2 | 0.0 | -0.77 | 0.90 | 0.84 | 1.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66396 | 8195 | 60 | 0 | 22 | 0 | 0 | logfile |
✘ | 8oUW | 17204 | 2024-01-17 | 2023-04-25 | 3.75 | 3.90 | 3.25 | 3.5 | 0.006 | 0.91 | 0.0 | 0.05 | 14.71 | 0.01 | 2.008 | 0.19 | 0.38 | 2.0 | 98.0 | 0.0 | 0.31 | 0.81 | 0.65 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53754 | 6564 | 25 | 67 | 13 | 0 | 0 | logfile |