Table showing results for March 2023

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	6UWZ	20928	2023-03-16	2019-11-06	2.69	2.88	2.77	2.8	0.011	0.82	0.0	0.05	13.95	0.01	1.501	8.35	0.00	5.6	94.4	0.0	-2.64	0.74	0.87	4.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18330	2178	23	0	40	138	0	logfile
✘	7T6X	25730	2023-03-13	2021-12-14	3.83	4.14	3.83	4.0	0.022	1.97	0.0	0.13	9.71	0.02	1.505	3.89	0.00	3.8	96.1	0.1	-0.16	0.77	0.82	2.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9217	1140	19	0	37	0	0	logfile
✘	7DH0	30677	2023-03-13	2020-11-12	4.2	4.70	—	4.5	0.007	1.27	0.0	0.06	11.24	0.01	1.514	6.99	0.60	16.3	83.1	0.6	-5.67	0.84	0.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	60091	7904	57	0	17	0	0	logfile
✘	7EJA	31157	2023-03-13	2021-04-01	3.6	4.27	—	4.1	0.005	0.84	2.0	0.06	13.05	0.00	1.533	17.71	0.11	6.0	94.0	0.0	-0.43	0.70	0.80	1.56	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8584	1097	6	0	1	0	0	logfile
✘	7UV9	26809	2023-03-15	2022-04-29	3.2	2.64	3.07	3.0	0.009	0.89	0.0	0.06	26.20	0.01	1.561	5.75	0.30	1.4	98.6	0.0	1.22	0.77	0.75	1.70	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15342	1164	11	292	2	0	0	logfile
✘	6UPK	20840	2023-03-15	2019-10-17	4.9	7.69	6.08	7.1	0.005	0.94	0.0	0.05	20.35	0.01	1.570	20.39	0.00	7.2	92.8	0.0	-3.94	0.89	0.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13861	1314	10	144	54	0	0	logfile
✘	7AWT	11930	2023-03-17	2020-11-09	2.73	3.29	—	3.2	0.012	1.12	8.0	1.95	14.80	0.01	1.618	15.63	1.58	8.0	92.0	0.0	-3.38	0.67	0.74	3.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18891	2375	17	0	18	125	0	logfile
✘	6TM5	10518	2023-03-14	2019-12-03	3.9	4.07	—	4.1	0.010	1.11	0.0	0.05	15.92	0.01	1.619	28.83	0.76	11.9	87.8	0.3	-4.46	0.36	0.48	0.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	63885	8117	23	0	3	0	0	logfile
✘	6CMX	7526	2023-03-13	2018-03-06	3.1	3.31	—	3.3	0.009	1.01	0.0	0.14	10.09	0.01	1.638	21.48	1.51	9.6	90.2	0.2	-3.85	0.72	0.76	3.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10139	1300	4	0	17	0	0	logfile
✘	6BZE	7314	2023-03-15	2017-12-23	4.0	4.03	—	4.0	0.009	1.42	0.0	0.08	17.34	0.01	1.648	79.81	9.00	13.2	86.4	0.4	-5.34	0.37	0.48	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7072	848	8	0	0	0	0	logfile
✘	6X68	22073	2023-03-13	2020-05-27	3.66	3.88	—	3.8	0.012	1.74	10.0	0.09	20.68	0.01	1.652	4.17	0.57	2.5	97.2	0.3	-0.38	0.72	0.77	1.47	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10246	956	7	124	8	0	0	logfile
✘	7DoK	30795	2023-03-14	2020-12-14	2.73	2.84	—	2.9	0.009	1.01	0.0	0.07	13.35	0.01	1.695	5.72	0.60	2.4	97.6	0.0	-2.40	0.71	0.85	3.23	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11534	1323	8	44	9	2	0	logfile
✘	6oER	20035	2023-03-17	2019-03-27	3.29	3.60	—	3.4	0.007	0.78	0.0	0.05	19.70	0.01	1.709	13.72	0.30	9.5	90.3	0.2	-4.65	0.85	0.84	3.60	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19482	1952	11	206	6	0	0	logfile
✘	6RoH	32512	2023-03-14	2019-05-13	2.8	2.20	—	40.0	0.006	0.89	0.0	0.05	13.56	0.01	1.709	4.00	0.23	3.4	96.6	0.0	-4.73	0.04	0.00	0.30	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11758	1449	7	0	9	2	0	logfile
✘	7W01	32233	2023-03-14	2021-11-17	3.3	3.43	—	3.4	0.011	1.11	1.0	0.06	15.95	0.01	1.717	9.85	0.60	13.3	85.9	0.8	-4.55	0.68	0.86	2.97	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12724	1598	1	0	7	0	0	logfile
✘	6XKT	22224	2023-03-14	2020-06-27	3.75	3.88	—	3.8	0.009	0.99	1.0	0.07	13.78	0.01	1.732	26.25	0.08	16.5	83.1	0.4	-4.20	0.75	0.79	2.04	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13079	1678	12	0	8	0	0	logfile
✘	6WPW	21866	2023-03-13	2020-04-28	3.1	3.57	—	3.5	0.007	0.95	0.0	0.06	10.18	0.01	1.735	6.24	0.00	5.9	94.1	0.0	-4.62	0.57	0.80	4.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9262	1176	6	0	0	0	0	logfile
✘	5iRX	8117	2023-03-15	2016-03-14	2.95	3.39	2.91	3.3	0.014	1.44	0.0	0.07	15.36	0.01	1.744	9.65	0.00	10.7	89.2	0.1	-6.45	0.67	0.77	3.80	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13162	1726	12	0	20	0	0	logfile
✘	7AFH	11765	2023-03-16	2020-09-19	3.59	4.69	6.65	2.8	0.009	0.89	2.0	0.05	16.78	0.02	1.752	32.75	0.00	7.5	92.5	0.0	-2.59	0.88	0.82	0.54	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18482	1103	11	456	12	0	0	logfile
✘	7SQ1	25376	2023-03-16	2021-11-04	3.8	4.01	3.71	3.8	0.012	1.48	0.0	0.08	11.33	0.01	1.753	3.57	0.74	1.2	98.8	0.0	2.40	0.76	0.80	2.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18340	2157	42	0	98	0	0	logfile

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