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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6S5T | 10100 | 2023-03-12 | 2019-07-02 | 4.15 | 4.28 | 4.17 | 4.2 | 0.007 | 1.48 | 3.0 | 0.09 | 17.31 | 0.00 | 2.450 | 5.08 | 3.93 | 7.1 | 92.4 | 0.6 | -4.05 | 0.75 | 0.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6958 | 896 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 7Ji3 | 22343 | 2023-03-12 | 2020-07-22 | 3.46 | 4.28 | — | 4.0 | 0.005 | 0.79 | 0.0 | 0.05 | 13.46 | 0.01 | 2.365 | 6.77 | 0.00 | 3.6 | 96.4 | 0.0 | -5.13 | 0.64 | 0.72 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6000 | 777 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7Z12 | 14438 | 2023-03-16 | 2022-02-24 | 3.0 | 3.83 | — | 3.4 | 0.007 | 1.03 | 1.0 | 0.06 | 15.28 | 0.01 | 0.865 | 31.24 | 1.37 | 15.0 | 83.9 | 1.1 | -3.04 | 0.84 | 0.81 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18352 | 2286 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7VFF | 31951 | 2023-03-14 | 2021-09-13 | 4.1 | 3.76 | 3.90 | 4.0 | 0.007 | 0.72 | 0.0 | 0.05 | 13.87 | 0.00 | 2.334 | 2.40 | 0.41 | 3.6 | 96.4 | 0.0 | -0.82 | 0.79 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12579 | 1581 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6X2L | 22011 | 2023-03-13 | 2020-05-20 | 2.85 | 2.95 | — | 2.9 | 0.009 | 0.96 | 0.0 | 0.06 | 13.68 | 0.01 | 2.078 | 2.99 | 0.00 | 2.5 | 97.5 | 0.0 | -6.46 | 0.64 | 0.88 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9396 | 1233 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7JGH | 22327 | 2023-03-17 | 2020-07-19 | 3.36 | 3.67 | — | 3.6 | 0.007 | 0.83 | 1.0 | 0.08 | 11.51 | 0.00 | 2.092 | 7.77 | 0.39 | 5.3 | 94.7 | 0.0 | -0.15 | 0.55 | 0.63 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19608 | 1421 | 3 | 0 | 12 | 0 | 7725 | logfile |
✘ | 8A01 | 15044 | 2023-03-12 | 2022-05-26 | 3.2 | 3.25 | 3.20 | 3.2 | 0.002 | 0.44 | 0.0 | 0.05 | 14.81 | 0.00 | 2.289 | 4.13 | 0.00 | 2.0 | 98.0 | 0.0 | 0.02 | 0.48 | 0.86 | 2.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5511 | 717 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6XWR | 10636 | 2023-03-13 | 2020-01-24 | 3.22 | 3.96 | — | 3.7 | 0.008 | 0.75 | 0.0 | 0.05 | 12.81 | 0.00 | 2.122 | 11.13 | 0.00 | 5.7 | 94.3 | 0.0 | -2.71 | 0.74 | 0.85 | 2.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9564 | 1278 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6oUA | 20200 | 2023-03-12 | 2019-05-04 | 4.18 | 4.32 | — | 4.3 | 0.008 | 1.37 | 1.0 | 0.07 | 13.97 | 0.01 | 2.294 | 7.03 | 2.35 | 17.4 | 82.3 | 0.3 | -5.89 | 0.72 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5208 | 637 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7UL4 | 26591 | 2023-03-11 | 2022-04-03 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2524 | 351 | 3 | 0 | 1 | 4 | 0 | logfile |
✘ | 7WSF | 32756 | 2023-03-15 | 2022-01-29 | 2.87 | 3.08 | — | 3.1 | 0.003 | 0.44 | 0.0 | 0.04 | 11.23 | 0.00 | 2.016 | 6.14 | 3.87 | 2.7 | 97.3 | 0.0 | -0.12 | 0.72 | 0.81 | 4.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7170 | 879 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 8DLY | 27520 | 2023-03-11 | 2022-07-08 | 3.0 | 3.63 | 2.92 | 3.6 | 0.005 | 0.94 | 0.0 | 0.06 | 12.37 | 0.01 | 2.317 | 1.86 | 0.37 | 3.5 | 96.5 | 0.0 | -1.46 | 0.63 | 0.81 | 3.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2483 | 314 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 6XS6 | 22301 | 2023-03-16 | 2020-07-15 | 3.7 | 2.21 | — | 2.2 | 0.004 | 0.83 | 0.0 | 0.05 | 14.26 | 0.01 | 2.240 | 4.49 | 0.00 | 6.1 | 93.9 | 0.0 | -1.99 | 0.57 | 0.59 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18294 | 2357 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7D5i | 30582 | 2023-03-12 | 2020-09-26 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6232 | 793 | 3 | 0 | 3 | 0 | 0 | logfile |
✘ | 7P14 | 13155 | 2023-03-12 | 2021-07-01 | 3.66 | 3.82 | 3.50 | 3.8 | 0.004 | 0.64 | 0.0 | 0.04 | 16.56 | 0.00 | 2.295 | 7.45 | 0.00 | 2.7 | 97.3 | 0.0 | 1.11 | 0.60 | 0.78 | 2.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3796 | 454 | 3 | 0 | 3 | 0 | 0 | logfile |
✘ | 7SWP | 25478 | 2023-03-12 | 2021-11-20 | 3.8 | 3.74 | — | 4.0 | 0.008 | 0.92 | 0.0 | 0.05 | 12.87 | 0.01 | 2.202 | 40.14 | 0.00 | 12.1 | 87.9 | 0.0 | -2.17 | 0.51 | 0.71 | 1.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3372 | 436 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PCV | 20308 | 2023-03-13 | 2019-06-18 | 3.2 | 2.93 | 3.33 | 3.3 | 0.006 | 0.98 | 0.0 | 0.06 | 14.31 | 0.01 | 2.235 | 6.90 | 0.71 | 4.0 | 96.0 | 0.0 | -3.37 | 0.71 | 0.72 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9035 | 1155 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7WAH | 32385 | 2023-03-14 | 2021-12-14 | 2.45 | 2.65 | — | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 11.56 | 0.00 | 2.239 | 7.07 | 0.55 | 1.7 | 98.3 | 0.0 | 0.28 | 0.64 | 0.80 | 3.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13217 | 1473 | 3 | 62 | 4 | 0 | 0 | logfile |
✘ | 6PYH | 20524 | 2023-03-14 | 2019-07-29 | 4.3 | 4.52 | — | 4.3 | 0.016 | 1.05 | 0.0 | 0.05 | 14.64 | 0.01 | 2.079 | 28.75 | 0.55 | 18.2 | 81.6 | 0.2 | -5.21 | 0.84 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13187 | 1648 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6o1U | 0605 | 2023-03-17 | 2019-02-21 | 2.8 | 3.27 | — | 3.2 | 0.010 | 1.08 | 4.0 | 0.06 | 14.75 | 0.01 | 2.180 | 5.37 | 2.65 | 4.6 | 95.4 | 0.0 | -5.22 | 0.69 | 0.83 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19612 | 2456 | 4 | 0 | 0 | 0 | 0 | logfile |