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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7DX4 | 30895 | 2023-05-04 | 2021-01-18 | 3.6 | 3.96 | — | 3.8 | 0.007 | 1.00 | 0.0 | 0.06 | 9.71 | 0.01 | 0.766 | 7.28 | 0.23 | 6.0 | 93.7 | 0.3 | -4.20 | 0.71 | 0.79 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8234 | 1027 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 7T6X | 25730 | 2023-05-04 | 2021-12-14 | 3.83 | 4.14 | 3.83 | 4.0 | 0.022 | 1.97 | 0.0 | 0.13 | 9.71 | 0.02 | 1.505 | 3.89 | 0.00 | 3.8 | 96.1 | 0.1 | -0.16 | 0.77 | 0.82 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9217 | 1140 | 19 | 0 | 37 | 0 | 0 | logfile |
✘ | 7YQ6 | 34021 | 2023-05-06 | 2022-08-05 | 4.18 | 4.67 | 4.33 | 4.4 | 0.019 | 1.34 | 0.0 | 0.06 | 17.92 | 0.03 | 2.222 | 7.46 | 0.35 | 8.5 | 91.5 | 0.0 | -3.94 | 0.84 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13990 | 1592 | 4 | 48 | 0 | 0 | 0 | logfile |
✘ | 7QTi | 14141 | 2023-05-16 | 2022-01-14 | 3.04 | 3.98 | — | 3.7 | 0.004 | 0.71 | 1.0 | 0.05 | 13.45 | 0.01 | 2.151 | 8.80 | 0.91 | 5.5 | 94.2 | 0.3 | -0.44 | 0.72 | 0.68 | 1.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40094 | 5061 | 31 | 0 | 64 | 0 | 0 | logfile |
✘ | 7RWA | 24712 | 2023-05-07 | 2021-08-19 | 4.7 | 5.66 | 4.89 | 4.6 | 0.003 | 0.89 | 0.0 | 0.05 | 5.84 | 0.00 | 1.914 | 2.65 | 0.00 | 5.8 | 93.7 | 0.5 | -0.12 | 0.84 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16158 | 3244 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RH5 | 24455 | 2023-05-15 | 2021-07-16 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93342 | 6072 | 44 | 0 | 66 | 0 | 44380 | logfile |
✘ | 7TLB | 25986 | 2023-05-09 | 2022-01-18 | 3.06 | 3.26 | — | 3.2 | 0.012 | 1.74 | 1.0 | 0.09 | 13.14 | 0.01 | 2.531 | 0.11 | 0.82 | 5.3 | 94.7 | 0.1 | -1.00 | 0.54 | 0.56 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22806 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7KE9 | 22835 | 2023-05-09 | 2020-10-10 | 3.08 | 3.62 | — | 3.5 | 0.013 | 1.74 | 0.0 | 0.09 | 12.23 | 0.01 | 2.491 | 0.11 | 0.04 | 5.8 | 94.0 | 0.2 | -0.81 | 0.80 | 0.80 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✘ | 7LN4 | 23448 | 2023-05-14 | 2021-02-06 | 3.0 | 3.91 | 3.03 | 3.5 | 0.009 | 0.65 | 0.0 | 0.04 | 12.72 | 0.01 | 2.019 | 7.53 | 0.03 | 2.1 | 97.9 | 0.0 | 1.49 | 0.80 | 0.71 | 1.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35094 | 4432 | 13 | 0 | 42 | 0 | 0 | logfile |
✘ | 7LWJ | 23547 | 2023-05-10 | 2021-03-01 | 3.24 | 3.45 | — | 3.3 | 0.014 | 1.83 | 2.0 | 0.10 | 13.55 | 0.01 | 2.482 | 0.34 | 0.84 | 7.0 | 92.8 | 0.2 | -1.78 | 0.70 | 0.68 | 1.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23840 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✘ | 8DK2 | 27481 | 2023-05-10 | 2022-07-01 | 4.1 | 4.81 | 4.17 | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.54 | 0.00 | 1.988 | 7.72 | 2.88 | 3.7 | 96.3 | 0.0 | 2.05 | 0.84 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23727 | 2840 | 12 | 52 | 4 | 0 | 0 | logfile |
✘ | 7WTo | 32793 | 2023-05-17 | 2022-02-05 | 3.5 | 3.41 | — | 3.3 | 0.005 | 0.84 | 0.0 | 0.04 | 15.98 | 0.01 | 2.105 | 6.35 | 0.05 | 7.9 | 92.0 | 0.1 | -2.03 | 0.85 | 0.84 | 2.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 44490 | 2383 | 17 | 1200 | 1 | 0 | 0 | logfile |
✘ | 5ADY | 3133 | 2023-05-16 | 2015-08-25 | 4.5 | 4.75 | — | 4.5 | 0.011 | 1.28 | 0.0 | 0.06 | 18.75 | 0.01 | 1.391 | 57.89 | 0.21 | 11.7 | 81.7 | 6.7 | -3.35 | 0.72 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 97364 | 4197 | 35 | 3020 | 2 | 0 | 0 | logfile |
✘ | 7RH7 | 24457 | 2023-05-15 | 2021-07-16 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93207 | 6072 | 44 | 0 | 64 | 0 | 44381 | logfile |
✘ | 6Vi0 | 21208 | 2023-05-09 | 2020-01-10 | 3.43 | 3.96 | 3.49 | 3.8 | 0.008 | 1.12 | 3.0 | 0.10 | 13.99 | 0.01 | 2.241 | 6.11 | 1.23 | 7.8 | 92.0 | 0.2 | -5.43 | 0.80 | 0.83 | 2.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20823 | 2418 | 45 | 0 | 135 | 0 | 0 | logfile |
✘ | 7M5Y | 23685 | 2023-05-07 | 2021-03-25 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15447 | 1000 | 1 | 0 | 24 | 8 | 7534 | logfile |
✘ | 7oi7 | 12920 | 2023-05-14 | 2021-05-11 | 3.5 | 3.35 | — | 3.3 | 0.006 | 0.95 | 1.0 | 0.05 | 15.05 | 0.01 | 2.041 | 6.91 | 0.10 | 4.3 | 95.7 | 0.0 | -1.48 | 0.73 | 0.75 | 2.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 89747 | 8101 | 60 | 1110 | 52 | 0 | 0 | logfile |
✘ | 7WoR | 32656 | 2023-05-12 | 2022-01-22 | 3.7 | 2.87 | — | 3.2 | 0.003 | 0.53 | 0.0 | 0.05 | 9.19 | 0.01 | 2.216 | 8.02 | 5.34 | 7.7 | 92.2 | 0.1 | -4.04 | 0.72 | 0.71 | 1.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29670 | 3799 | 9 | 0 | 23 | 0 | 0 | logfile |
✘ | 7ZJ7 | 14743 | 2023-05-05 | 2022-04-08 | 3.95 | 4.15 | 3.84 | 4.0 | 0.013 | 1.90 | 0.0 | 0.09 | 15.37 | 0.02 | 2.329 | 1.87 | 0.55 | 4.8 | 95.2 | 0.0 | -3.03 | 0.80 | 0.81 | 2.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11958 | 1458 | 18 | 0 | 36 | 0 | 0 | logfile |
✘ | 6YEF | 10791 | 2023-05-15 | 2020-03-24 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 141837 | 5351 | 60 | 4639 | 288 | 0 | 0 | logfile |