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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6YJ5 | 10816 | 2025-02-10 | 2020-04-02 | 3.5 | 2.92 | 3.56 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 13.19 | 0.01 | 2.183 | 4.22 | 0.00 | 12.5 | 87.5 | 0.0 | -5.13 | 0.42 | 0.62 | 3.01 | 3.3 | 0.003 | 0.65 | 0.0 | 0.05 | 14.87 | 0.00 | 2.525 | 6.34 | 0.61 | 6.9 | 93.1 | 0.0 | -1.84 | 0.77 | 0.51 | 0.71 | 2.50 | 2061 | 306 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ESA | 28573 | 2025-02-10 | 2022-10-13 | 3.4 | 3.68 | 3.37 | 3.6 | 0.004 | 0.49 | 0.0 | 0.04 | 14.83 | 0.00 | 2.243 | 5.75 | 0.30 | 4.0 | 96.0 | 0.0 | -0.99 | 0.65 | 0.84 | 2.85 | 3.6 | 0.002 | 0.49 | 0.0 | 0.04 | 16.45 | 0.00 | 2.466 | 5.25 | 1.20 | 2.1 | 97.9 | 0.0 | -0.18 | 0.38 | 0.64 | 0.86 | 2.00 | 3140 | 384 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WCU | 32429 | 2025-02-10 | 2021-12-20 | 3.09 | 3.27 | — | 3.2 | 0.009 | 1.15 | 0.0 | 0.06 | 13.76 | 0.01 | 2.289 | 6.61 | 0.29 | 7.8 | 92.2 | 0.0 | -2.63 | 0.61 | 0.82 | 3.98 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 15.63 | 0.01 | 2.536 | 9.29 | 5.14 | 7.4 | 92.6 | 0.0 | -2.19 | 0.48 | 0.61 | 0.83 | 3.14 | 3248 | 416 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y7K | 33668 | 2025-02-10 | 2022-06-22 | 4.4 | 4.96 | 5.46 | 4.3 | 0.010 | 1.63 | 0.0 | 0.07 | 13.11 | 0.01 | 2.215 | 33.93 | 3.90 | 10.3 | 86.1 | 3.6 | -2.50 | 0.71 | 0.63 | — | 4.4 | 0.003 | 0.77 | 0.0 | 0.05 | 11.24 | 0.00 | 2.611 | 8.30 | 0.00 | 6.0 | 93.5 | 0.5 | -1.80 | 1.43 | 0.73 | 0.68 | — | 2942 | 422 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BC5 | 12139 | 2025-02-10 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.004 | 0.81 | 0.0 | 0.05 | 17.27 | 0.00 | 2.517 | 15.24 | 5.34 | 7.5 | 92.5 | 0.0 | -3.13 | 1.30 | 0.24 | 0.59 | 1.31 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2025-02-10 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.004 | 0.88 | 0.0 | 0.05 | 7.64 | 0.00 | 2.240 | 3.38 | 0.00 | 18.9 | 80.5 | 0.6 | -3.12 | 2.45 | 0.48 | 0.54 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WRo | 32734 | 2025-02-10 | 2022-01-27 | 3.4 | 3.62 | — | 3.6 | 0.008 | 1.11 | 0.0 | 0.07 | 13.65 | 0.01 | 2.309 | 7.42 | 0.00 | 7.6 | 92.4 | 0.0 | -1.94 | 0.58 | 0.76 | 2.56 | 3.6 | 0.003 | 0.68 | 0.0 | 0.05 | 15.04 | 0.00 | 2.396 | 10.64 | 4.62 | 4.9 | 95.1 | 0.0 | -1.35 | 0.35 | 0.58 | 0.77 | 2.35 | 3179 | 412 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UiU | 26553 | 2025-02-10 | 2022-03-29 | 2.8 | 3.11 | 2.72 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 13.60 | 0.00 | 2.356 | 3.35 | 0.00 | 4.8 | 95.2 | 0.0 | -2.09 | 0.28 | 0.82 | 1.99 | 3.3 | 0.005 | 0.90 | 0.0 | 0.04 | 18.25 | 0.00 | 2.504 | 8.38 | 1.67 | 6.0 | 94.0 | 0.0 | -2.70 | 1.37 | 0.28 | 0.89 | 2.33 | 607 | 85 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BDZ | 15995 | 2025-02-10 | 2022-10-20 | 3.13 | 3.37 | 1.52 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 12.41 | 0.00 | 2.264 | 6.23 | 0.00 | 3.0 | 97.0 | 0.0 | 2.26 | 0.48 | 0.84 | 2.77 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.42 | 0.00 | 2.509 | 6.39 | 1.64 | 2.0 | 98.0 | 0.0 | 2.99 | 0.44 | 0.49 | 0.86 | 2.77 | 3309 | 414 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BER | 16009 | 2025-02-10 | 2022-10-21 | 4.0 | 4.97 | 1.55 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 12.68 | 0.00 | 2.214 | 12.92 | 0.00 | 4.0 | 96.0 | 0.0 | 2.47 | 0.55 | 0.79 | — | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 14.43 | 0.00 | 2.436 | 8.21 | 0.82 | 4.7 | 95.3 | 0.0 | 2.79 | 1.18 | 0.54 | 0.81 | — | 3309 | 414 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iHK | 35447 | 2025-02-10 | 2023-02-22 | 3.21 | 3.56 | 3.40 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 16.21 | 0.00 | 2.246 | 4.47 | 0.00 | 2.8 | 97.2 | 0.0 | -0.99 | 0.51 | 0.79 | 1.56 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 17.05 | 0.00 | 2.628 | 3.13 | 4.24 | 3.9 | 96.1 | 0.0 | 0.91 | 0.38 | 0.48 | 0.78 | 1.01 | 2253 | 283 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2025-02-10 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 15.48 | 0.00 | 2.443 | 12.46 | 1.39 | 8.8 | 90.0 | 1.2 | -2.70 | 4.01 | 0.25 | 0.69 | 1.62 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 7YD1 | 33745 | 2025-02-10 | 2022-07-02 | 2.99 | 2.38 | 7.99 | 2.2 | 0.002 | 0.49 | 0.0 | 0.04 | 9.00 | 0.00 | 2.215 | 6.14 | 5.46 | 10.0 | 90.0 | 0.0 | -4.06 | 0.75 | 0.74 | 3.20 | 2.2 | 0.007 | 0.80 | 0.0 | 0.05 | 13.40 | 0.01 | 2.520 | 10.60 | 3.01 | 11.6 | 88.4 | 0.0 | -2.18 | 0.59 | 0.77 | 0.79 | 3.13 | 3305 | 428 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M6S | 3451 | 2025-02-10 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.4 | 0.003 | 0.70 | 0.0 | 0.03 | 17.89 | 0.00 | 2.464 | 6.91 | 0.00 | 7.3 | 92.7 | 0.0 | 1.40 | 2.23 | 0.03 | 0.07 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 7YNR | 33969 | 2025-02-10 | 2022-07-31 | 2.9 | 2.79 | 1.55 | 3.2 | 0.003 | 0.46 | 0.0 | 0.05 | 10.05 | 0.00 | 2.424 | 7.49 | 0.00 | 1.7 | 98.3 | 0.0 | -3.30 | 0.41 | 0.87 | 6.76 | 3.2 | 0.003 | 0.47 | 0.0 | 0.05 | 12.92 | 0.00 | 2.618 | 3.46 | 0.00 | 4.2 | 95.8 | 0.0 | -1.92 | 0.22 | 0.41 | 0.88 | 5.75 | 2526 | 366 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V22 | 31634 | 2025-02-10 | 2021-08-07 | 3.38 | 3.61 | — | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.10 | 0.00 | 2.236 | 8.81 | 0.46 | 12.1 | 87.5 | 0.4 | -2.81 | 0.53 | 0.77 | 4.24 | 3.6 | 0.005 | 0.69 | 0.0 | 0.05 | 15.74 | 0.00 | 2.600 | 12.95 | 1.84 | 12.1 | 87.5 | 0.4 | -2.43 | 0.56 | 0.53 | 0.80 | 3.65 | 1958 | 240 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X0V | 21985 | 2025-02-10 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.46 | 0.0 | 0.03 | 11.61 | 0.00 | 2.465 | 17.39 | 0.00 | 4.0 | 96.0 | 0.0 | 2.56 | 1.19 | 0.40 | 0.75 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✔ | 7UHB | 26511 | 2025-02-10 | 2022-03-26 | 3.0 | 3.17 | 2.97 | 3.2 | 0.011 | 1.36 | 3.0 | 0.12 | 9.64 | 0.00 | 2.562 | 5.08 | 1.42 | 3.0 | 96.6 | 0.4 | -0.52 | 0.52 | 0.54 | -0.09 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 16.12 | 0.00 | 2.506 | 6.04 | 3.32 | 3.0 | 97.0 | 0.0 | 0.58 | 2.43 | 0.68 | 0.83 | 3.64 | 2141 | 270 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7WCK | 32423 | 2025-02-10 | 2021-12-20 | 3.49 | 3.79 | — | 3.6 | 0.008 | 1.35 | 1.0 | 0.07 | 13.91 | 0.01 | 2.057 | 11.02 | 0.28 | 7.6 | 90.7 | 1.7 | -3.09 | 0.67 | 0.79 | 2.16 | 3.6 | 0.004 | 0.83 | 0.0 | 0.05 | 14.81 | 0.01 | 2.525 | 11.96 | 2.25 | 6.9 | 92.6 | 0.5 | -2.14 | 0.48 | 0.68 | 0.81 | 1.80 | 3245 | 416 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNP | 33968 | 2025-02-10 | 2022-07-31 | 2.8 | 2.38 | 2.15 | 3.4 | 0.012 | 0.97 | 0.0 | 0.06 | 13.69 | 0.00 | 2.265 | 10.48 | 0.00 | 6.5 | 93.5 | 0.0 | -3.88 | 0.39 | 0.78 | 4.28 | 3.5 | 0.002 | 0.47 | 0.0 | 0.05 | 15.91 | 0.00 | 2.644 | 5.90 | 4.26 | 3.1 | 96.9 | 0.0 | -2.28 | 1.79 | 0.33 | 0.79 | 5.02 | 2568 | 366 | 8 | 0 | 2 | 0 | 0 | logfile |