phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/5gw5_9541/05_2022/5gw5_9541.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/5gw5_9541/05_2022/5gw5_9541.map refinement.macro_cycles=10 scattering_table=electron resolution=4.6 write_initial_geo_file=False >& 5gw5.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/5gw5_9541/05_2022/5gw5_9541.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/5gw5_9541/05_2022/5gw5_9541.map 4.6
Refinement ran but no refined model file.