phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6lrs_0960/05_2023/6lrs_0960.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6lrs_0960/05_2023/6lrs_0960.map refinement.macro_cycles=10 scattering_table=electron resolution=3.37 write_initial_geo_file=False >& 6lrs.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6lrs_0960/05_2023/6lrs_0960.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6lrs_0960/05_2023/6lrs_0960.map 3.37
Refinement ran but no refined model file.