phenix.real_space_refine /net/cci-nas-00/data/ceres_data/6lyg_30016/08_2025/6lyg_30016.cif /net/cci-nas-00/data/ceres_data/6lyg_30016/08_2025/6lyg_30016.map refinement.macro_cycles=10 scattering_table=electron resolution=3.1 write_initial_geo_file=False >& 6lyg.txt failed.

/net/cci-nas-00/data/ceres_data/6lyg_30016/08_2025/6lyg_30016.cif /net/cci-nas-00/data/ceres_data/6lyg_30016/08_2025/6lyg_30016.map 3.1
Refinement ran but no refined model file.