phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6of4_20042/04_2022/6of4_20042.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6of4_20042/04_2022/6of4_20042.map refinement.macro_cycles=10 scattering_table=electron resolution=3.2 write_initial_geo_file=False >& 6of4.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6of4_20042/04_2022/6of4_20042.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6of4_20042/04_2022/6of4_20042.map 3.2
Refinement ran but no refined model file.