phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6px1_20516/02_2023/6px1_20516.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6px1_20516/02_2023/6px1_20516.map refinement.macro_cycles=10 scattering_table=electron resolution=3.3 write_initial_geo_file=False >& 6px1.txt failed. /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6px1_20516/02_2023/6px1_20516.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6px1_20516/02_2023/6px1_20516.map 3.3 Refinement ran but no refined model file.