phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6q2r_20578/05_2023/6q2r_20578_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6q2r_20578/05_2023/6q2r_20578.map refinement.macro_cycles=10 scattering_table=electron resolution=4.3 write_initial_geo_file=False >& 6q2r.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6q2r_20578/05_2023/6q2r_20578.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6q2r_20578/05_2023/6q2r_20578.map 4.3
Refinement ran but no refined model file.