phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6rvv_4443/12_2021/6rvv_4443.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6rvv_4443/12_2021/6rvv_4443.map refinement.macro_cycles=10 scattering_table=electron resolution=3.7 write_initial_geo_file=False >& 6rvv.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6rvv_4443/12_2021/6rvv_4443.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6rvv_4443/12_2021/6rvv_4443.map 3.7
Refinement ran but no refined model file.