phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6ssx_10307/11_2022/6ssx_10307.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6ssx_10307/11_2022/6ssx_10307.map refinement.macro_cycles=10 scattering_table=electron resolution=2.98 write_initial_geo_file=False >& 6ssx.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6ssx_10307/11_2022/6ssx_10307.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6ssx_10307/11_2022/6ssx_10307.map 2.98
Refinement ran but no refined model file.