phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6vfi_21173/12_2021/6vfi_21173.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6vfi_21173/12_2021/6vfi_21173.map refinement.macro_cycles=10 scattering_table=electron resolution=4.54 write_initial_geo_file=False >& 6vfi.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6vfi_21173/12_2021/6vfi_21173.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6vfi_21173/12_2021/6vfi_21173.map 4.54
Refinement ran but no refined model file.