phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6wjv_21701/03_2023/6wjv_21701.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6wjv_21701/03_2023/6wjv_21701.map refinement.macro_cycles=10 scattering_table=electron resolution=3.5 write_initial_geo_file=False >& 6wjv.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6wjv_21701/03_2023/6wjv_21701.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/6wjv_21701/03_2023/6wjv_21701.map 3.5
Refinement ran but no refined model file.