INPUT
  
    Reading model from /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7bkd_12210/04_2022/7bkd_12210.pdb
    Reading option "hydrogens=False" from command line
    Writing effective parameters to 7bkd_12210.eff

  Preparation for phenix.refine

    Ligand restraint generation using eLBOW, phenix.elbow
    

  Build ligand and use chemical components : SF4

MoleculeClass :  S: 4 Fe: 4 (CHEMICAL COMPONENTS format)
	8 atoms
	12 bonds
	0 angles
	0 dihedrals
	0 rings
	0 chirals

  Mapped the ligand (SF4) to the monomer library restraints
  

  Attempting to download Chemical Components file for 9S8
  Running eLBOW on 9S8.cif
Sorry: 
  eLBOW not suitable for metal clusters unless the --final_geometry option
  is used.