phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7dd9_30650/05_2023/7dd9_30650.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7dd9_30650/05_2023/7dd9_30650.map refinement.macro_cycles=10 scattering_table=electron resolution=2.4 write_initial_geo_file=False >& 7dd9.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7dd9_30650/05_2023/7dd9_30650.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7dd9_30650/05_2023/7dd9_30650.map 2.4
Refinement ran but no refined model file.