phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7e9p_31035/04_2023/7e9p_31035.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7e9p_31035/04_2023/7e9p_31035.map refinement.macro_cycles=10 scattering_table=electron resolution=3.69 write_initial_geo_file=False >& 7e9p.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7e9p_31035/04_2023/7e9p_31035.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7e9p_31035/04_2023/7e9p_31035.map 3.69
Refinement ran but no refined model file.