phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ezv_31391/04_2023/7ezv_31391.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ezv_31391/04_2023/7ezv_31391.map refinement.macro_cycles=10 scattering_table=electron resolution=3.3 write_initial_geo_file=False >& 7ezv.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ezv_31391/04_2023/7ezv_31391.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ezv_31391/04_2023/7ezv_31391.map 3.3
Refinement ran but no refined model file.