phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7jmg_22393/05_2022/7jmg_22393_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7jmg_22393/05_2022/7jmg_22393.map refinement.macro_cycles=10 scattering_table=electron resolution=4.5 write_initial_geo_file=False >& 7jmg.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7jmg_22393/05_2022/7jmg_22393.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7jmg_22393/05_2022/7jmg_22393.map 4.5
Refinement ran but no refined model file.