phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7k1v_22630/11_2022/7k1v_22630.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7k1v_22630/11_2022/7k1v_22630.map refinement.macro_cycles=10 scattering_table=electron resolution=4.6 write_initial_geo_file=False >& 7k1v.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7k1v_22630/11_2022/7k1v_22630.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7k1v_22630/11_2022/7k1v_22630.map 4.6
Refinement ran but no refined model file.