phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kaq_22780/12_2021/7kaq_22780.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kaq_22780/12_2021/7kaq_22780.map refinement.macro_cycles=10 scattering_table=electron resolution=4.0 write_initial_geo_file=False >& 7kaq.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kaq_22780/12_2021/7kaq_22780.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kaq_22780/12_2021/7kaq_22780.map 4.0
Refinement ran but no refined model file.