phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kif_22886/05_2023/7kif_22886_updated.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kif_22886/05_2023/7kif_22886.map refinement.macro_cycles=10 scattering_table=electron resolution=2.94 write_initial_geo_file=False >& 7kif.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kif_22886/05_2023/7kif_22886.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7kif_22886/05_2023/7kif_22886.map 2.94
Refinement ran but no refined model file.