phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7pij_13438/10_2021/7pij_13438_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7pij_13438/10_2021/7pij_13438.map refinement.macro_cycles=10 scattering_table=electron resolution=3.47 write_initial_geo_file=False >& 7pij.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7pij_13438/10_2021/7pij_13438.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7pij_13438/10_2021/7pij_13438.map 3.47
Refinement ran but no refined model file.