phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7q3l_13793/03_2024/7q3l_13793.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7q3l_13793/03_2024/7q3l_13793.map refinement.macro_cycles=10 scattering_table=electron resolution=2.21 write_initial_geo_file=False >& 7q3l.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7q3l_13793/03_2024/7q3l_13793.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7q3l_13793/03_2024/7q3l_13793.map 2.21
Refinement ran but no refined model file.