phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qku_14053/11_2022/7qku_14053.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qku_14053/11_2022/7qku_14053.map refinement.macro_cycles=10 scattering_table=electron resolution=2.57 write_initial_geo_file=False >& 7qku.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qku_14053/11_2022/7qku_14053.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qku_14053/11_2022/7qku_14053.map 2.57
Refinement ran but no refined model file.