phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qtk_14143/11_2022/7qtk_14143.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qtk_14143/11_2022/7qtk_14143.map refinement.macro_cycles=10 scattering_table=electron resolution=3.84 write_initial_geo_file=False >& 7qtk.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qtk_14143/11_2022/7qtk_14143.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7qtk_14143/11_2022/7qtk_14143.map 3.84
Refinement ran but no refined model file.