phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7r6k_24280/05_2023/7r6k_24280.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7r6k_24280/05_2023/7r6k_24280.map refinement.macro_cycles=10 scattering_table=electron resolution=3.17 write_initial_geo_file=False >& 7r6k.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7r6k_24280/05_2023/7r6k_24280.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7r6k_24280/05_2023/7r6k_24280.map 3.17
Refinement ran but no refined model file.