phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tf7_25864/05_2023/7tf7_25864.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tf7_25864/05_2023/7tf7_25864.map refinement.macro_cycles=10 scattering_table=electron resolution=2.13 write_initial_geo_file=False >& 7tf7.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tf7_25864/05_2023/7tf7_25864.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tf7_25864/05_2023/7tf7_25864.map 2.13
Refinement ran but no refined model file.