phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tjf_25924/10_2023/7tjf_25924_updated.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tjf_25924/10_2023/7tjf_25924.map refinement.macro_cycles=10 scattering_table=electron resolution=2.6 write_initial_geo_file=False >& 7tjf.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tjf_25924/10_2023/7tjf_25924.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tjf_25924/10_2023/7tjf_25924.map 2.6
Refinement ran but no refined model file.