EMRinger failed failed. /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tjy_25946/04_2024/7tjy_25946.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7tjy_25946/04_2024/7tjy_25946.map 3.8 Traceback (most recent call last): File "/net/marbles/raid1/dorothee/rerefine/cryoem/rerefine_script.py", line 425, in get_statistics map_inp = checked.map_manager().deep_copy()) File "/net/marbles/raid1/dorothee/rerefine/cryoem/rerefine_script.py", line 616, in get_emringer_score task_obj.run() File "/net/cci-filer2/raid1/xp/phenix/phenix-dev-5288/modules/cctbx_project/mmtbx/ringer/emringer.py", line 80, in run log = self.out File "/net/cci-filer2/raid1/xp/phenix/phenix-dev-5288/modules/cctbx_project/mmtbx/ringer/__init__.py", line 301, in __init__ be assessed with molecular graphics tools such as pymol or coot.""") Sorry: No residues could be scanned by EMRinger, so scores cannot be generated. There are a few problems that can lead to this, including not having modeled side chains (poly-A or poly-G models), mismatches between the map and model grid, or corrupted map density values. These problems can often be assessed with molecular graphics tools such as pymol or coot.