INPUT Reading model from /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ut9_26763/12_2022/7ut9_26763.pdb Reading option "hydrogens=False" from command line Writing effective parameters to 7ut9_26763.eff Ligand restraint generation using eLBOW, phenix.elbow Build ligand and use chemical components : ADP Build ligand and use chemical components : CLF MoleculeClass : S: 7 Fe: 8 (CHEMICAL COMPONENTS format) 15 atoms 24 bonds 0 angles 0 dihedrals 0 rings 0 chirals Build ligand and use monomer library to name atoms : HCA Using monomer library entry HCA as template Build ligand and use chemical components : ATP Attempting to download Chemical Components file for ICS Running eLBOW on ICS.cif Sorry: eLBOW not suitable for metal clusters unless the --final_geometry option is used.