phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ws3_32742/05_2023/7ws3_32742.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ws3_32742/05_2023/7ws3_32742.map refinement.macro_cycles=10 scattering_table=electron resolution=3.6 write_initial_geo_file=False >& 7ws3.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ws3_32742/05_2023/7ws3_32742.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7ws3_32742/05_2023/7ws3_32742.map 3.6
Refinement ran but no refined model file.