phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7x28_32961/05_2023/7x28_32961_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7x28_32961/05_2023/7x28_32961.map refinement.macro_cycles=10 scattering_table=electron resolution=2.49 write_initial_geo_file=False >& 7x28.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7x28_32961/05_2023/7x28_32961.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7x28_32961/05_2023/7x28_32961.map 2.49
Refinement ran but no refined model file.