phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7xdb_33142/05_2023/7xdb_33142_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7xdb_33142/05_2023/7xdb_33142.map refinement.macro_cycles=10 scattering_table=electron resolution=2.62 write_initial_geo_file=False >& 7xdb.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7xdb_33142/05_2023/7xdb_33142.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7xdb_33142/05_2023/7xdb_33142.map 2.62
Refinement ran but no refined model file.