phenix.real_space_refine /net/cci-nas-00/data/ceres_data/7yhk_33831/08_2025/7yhk_33831.cif /net/cci-nas-00/data/ceres_data/7yhk_33831/08_2025/7yhk_33831.map refinement.macro_cycles=10 scattering_table=electron resolution=3.14 write_initial_geo_file=False >& 7yhk.txt failed. /net/cci-nas-00/data/ceres_data/7yhk_33831/08_2025/7yhk_33831.cif /net/cci-nas-00/data/ceres_data/7yhk_33831/08_2025/7yhk_33831.map 3.14 Refinement ran but no refined model file.