phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7z12_14438/03_2023/7z12_14438.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7z12_14438/03_2023/7z12_14438.map refinement.macro_cycles=10 scattering_table=electron resolution=3.0 write_initial_geo_file=False >& 7z12.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7z12_14438/03_2023/7z12_14438.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/7z12_14438/03_2023/7z12_14438.map 3.0
Refinement ran but no refined model file.