phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8csr_26968/10_2023/8csr_26968_updated.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8csr_26968/10_2023/8csr_26968.map refinement.macro_cycles=10 scattering_table=electron resolution=2.54 write_initial_geo_file=False >& 8csr.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8csr_26968/10_2023/8csr_26968.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8csr_26968/10_2023/8csr_26968.map 2.54
Refinement ran but no refined model file.