phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8e6z_27931/10_2023/8e6z_27931_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8e6z_27931/10_2023/8e6z_27931.map refinement.macro_cycles=10 scattering_table=electron resolution=4.1 write_initial_geo_file=False >& 8e6z.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8e6z_27931/10_2023/8e6z_27931.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8e6z_27931/10_2023/8e6z_27931.map 4.1
Refinement ran but no refined model file.