phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8itu_35328/05_2023/8itu_35328_neut.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8itu_35328/05_2023/8itu_35328.map refinement.macro_cycles=10 scattering_table=electron resolution=3.68 write_initial_geo_file=False >& 8itu.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8itu_35328/05_2023/8itu_35328.pdb /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8itu_35328/05_2023/8itu_35328.map 3.68
Refinement ran but no refined model file.