phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8qc1_18325/09_2024/8qc1_18325.cif /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8qc1_18325/09_2024/8qc1_18325.map refinement.macro_cycles=10 scattering_table=electron resolution=2.5 write_initial_geo_file=False >& 8qc1.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8qc1_18325/09_2024/8qc1_18325.cif /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8qc1_18325/09_2024/8qc1_18325.map 2.5
Refinement ran but no refined model file.