phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8zaq_39884/11_2024/8zaq_39884_neut.cif /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8zaq_39884/11_2024/8zaq_39884.map refinement.macro_cycles=10 scattering_table=electron resolution=2.6 write_initial_geo_file=False >& 8zaq.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8zaq_39884/11_2024/8zaq_39884.cif /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/8zaq_39884/11_2024/8zaq_39884.map 2.6
Refinement ran but no refined model file.