phenix.real_space_refine /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/9fq0_50642/08_2024/9fq0_50642.cif /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/9fq0_50642/08_2024/9fq0_50642.map refinement.macro_cycles=10 scattering_table=electron resolution=4.67 write_initial_geo_file=False >& 9fq0.txt failed.

/net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/9fq0_50642/08_2024/9fq0_50642.cif /net/marbles/raid1/dorothee/rerefine/cryoem/data_no_H/9fq0_50642/08_2024/9fq0_50642.map 4.67
Refinement ran but no refined model file.