Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8ZDY	60017	2025-06-18	2024-05-03	3.6	2.44	3.62	2.0	0.010	1.40	1.0	0.08	18.13	0.01	2.258	10.27	1.97	7.0	92.9	0.2	-3.03	0.80	0.78	2.00	1.9	0.004	0.73	0.0	0.04	18.84	0.00	2.466	12.17	4.42	5.7	94.3	0.0	-1.19	0.55	0.80	0.78	2.05	21564	2630	10	58	0	0	0	logfile
✘	8ZDW	60015	2025-06-19	2024-05-03	3.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22602	2802	33	0	45	0	0	logfile
✘	8ZDW	60015	2025-01-24	2024-05-03	3.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22602	2802	33	0	45	0	0	logfile
✘	8ZDW	60015	2025-05-22	2024-05-03	3.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22602	2802	33	0	45	0	0	logfile
✔	8ZDY	60017	2025-05-21	2024-05-03	3.6	2.44	3.62	2.0	0.010	1.40	1.0	0.08	18.13	0.01	2.258	10.27	1.97	7.0	92.9	0.2	-3.03	0.80	0.78	2.00	2.0	0.004	0.71	0.0	0.04	18.80	0.00	2.472	11.16	4.23	5.5	94.5	0.0	-1.11	0.55	0.79	0.78	1.93	21564	2630	10	58	0	0	0	logfile
✔	8ZDY	60017	2025-01-24	2024-05-03	3.6	2.44	3.62	2.0	0.010	1.40	1.0	0.08	18.13	0.01	2.258	10.27	1.97	7.0	92.9	0.2	-3.03	0.80	0.78	2.00	2.0	0.004	0.71	0.0	0.04	18.80	0.00	2.472	11.16	4.23	5.5	94.5	0.0	-1.11	0.55	0.79	0.78	1.93	21564	2630	10	58	0	0	0	logfile
✔	9BoF	44734	2025-05-11	2024-05-03	2.61	3.47	2.64	3.2	0.010	0.87	0.0	0.05	15.88	0.01	1.813	15.83	6.87	5.3	94.5	0.2	-1.43	0.81	0.79	3.63	3.2	0.004	0.70	0.0	0.05	15.58	0.01	2.513	9.02	1.33	4.4	95.6	0.0	0.60	1.36	0.80	0.82	3.40	8076	1060	6	0	0	0	0	logfile
✔	9F76	50247	2025-05-13	2024-05-03	3.1	2.22	2.66	2.0	0.002	0.53	0.0	0.04	12.28	0.01	2.235	5.77	0.18	2.4	97.6	0.0	1.12	0.81	0.82	2.89	1.9	0.003	0.55	0.0	0.04	15.20	0.00	2.605	3.67	1.14	2.7	97.3	0.0	1.99	0.37	0.81	0.82	2.67	10179	1258	1	0	0	0	0	logfile
✔	8ZDR	60006	2025-06-06	2024-05-03	2.65	2.88	2.68	2.9	0.005	0.67	0.0	0.04	23.33	0.01	1.902	7.72	0.55	4.0	96.0	0.0	-0.52	0.66	0.75	3.99	2.9	0.004	0.60	0.0	0.04	23.00	0.00	2.118	12.28	2.19	3.6	96.4	0.0	0.02	0.90	0.65	0.75	3.16	7440	446	5	187	1	0	0	logfile
✔	8ZDR	60006	2025-03-12	2024-05-03	2.65	2.88	2.68	2.9	0.005	0.67	0.0	0.04	23.33	0.01	1.902	7.72	0.55	4.0	96.0	0.0	-0.52	0.66	0.75	3.99	2.9	0.004	0.61	0.0	0.04	22.96	0.00	2.120	10.51	3.01	4.0	96.0	0.0	0.09	0.90	0.65	0.75	3.08	7440	446	5	187	1	0	0	logfile
✔	8ZDR	60006	2025-05-11	2024-05-03	2.65	2.88	2.68	2.9	0.005	0.67	0.0	0.04	23.33	0.01	1.902	7.72	0.55	4.0	96.0	0.0	-0.52	0.66	0.75	3.99	2.9	0.004	0.61	0.0	0.04	23.02	0.00	2.108	11.51	2.74	3.8	96.2	0.0	0.00	0.90	0.65	0.75	3.24	7440	446	5	187	1	0	0	logfile
✔	9BoJ	44744	2025-06-04	2024-05-03	3.5	3.66	3.22	3.6	0.003	0.53	0.0	0.03	13.58	0.00	2.333	4.79	8.70	7.3	92.7	0.0	1.83	0.55	0.76	2.21	3.6	0.003	0.61	0.0	0.04	16.08	0.00	2.503	7.18	5.53	7.0	93.0	0.0	1.75	0.73	0.54	0.75	1.86	2560	321	1	0	0	0	0	logfile
✔	8ZDR	60006	2025-04-28	2024-05-03	2.65	2.88	2.68	2.9	0.005	0.67	0.0	0.04	23.33	0.01	1.902	7.72	0.55	4.0	96.0	0.0	-0.52	0.66	0.75	3.99	2.9	0.004	0.60	0.0	0.04	23.00	0.00	2.118	12.28	2.19	3.6	96.4	0.0	0.02	0.90	0.65	0.75	3.16	7440	446	5	187	1	0	0	logfile
✘	9F76	50247	2025-06-09	2024-05-03	3.1	2.22	2.66	2.0	0.002	0.53	0.0	0.04	12.28	0.01	2.235	5.77	0.18	2.4	97.6	0.0	1.12	0.81	0.82	2.89	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10179	1258	1	0	0	0	0	logfile
✔	9Boi	44742	2025-02-10	2024-05-03	3.22	3.46	3.18	3.4	0.006	0.91	0.0	0.05	16.43	0.01	2.319	3.63	0.00	2.6	97.4	0.0	-1.38	0.55	0.79	3.30	3.4	0.004	0.64	0.0	0.04	16.81	0.00	2.486	3.79	1.76	3.1	96.9	0.0	2.80	0.34	0.55	0.81	2.44	3256	423	2	0	1	0	0	logfile
✔	8ZDS	60007	2025-01-22	2024-05-03	3.1	4.13	3.31	3.4	0.004	0.70	0.0	0.04	12.72	0.00	2.199	7.96	0.12	4.5	95.5	0.0	0.63	0.78	0.80	3.21	3.4	0.005	0.70	0.0	0.04	13.84	0.00	2.526	6.22	0.70	4.6	95.4	0.0	0.53	1.15	0.80	0.83	3.22	69498	9053	33	0	0	0	0	logfile
✔	9Boi	44742	2025-05-09	2024-05-03	3.22	3.46	3.16	3.4	0.006	0.91	0.0	0.05	16.43	0.01	2.319	3.63	0.00	2.6	97.4	0.0	-1.38	0.55	0.79	3.30	3.4	0.004	0.64	0.0	0.04	16.81	0.00	2.486	3.79	1.76	3.1	96.9	0.0	2.80	0.34	0.55	0.81	2.44	3256	423	2	0	1	0	0	logfile
✔	9Boi	44742	2025-04-26	2024-05-03	3.22	3.46	3.16	3.4	0.006	0.91	0.0	0.05	16.43	0.01	2.319	3.63	0.00	2.6	97.4	0.0	-1.38	0.55	0.79	3.30	3.5	0.003	0.61	0.0	0.04	16.69	0.00	2.505	3.48	1.17	2.9	97.1	0.0	3.13	0.82	0.58	0.81	2.13	3256	423	2	0	1	0	0	logfile
✔	9Boi	44742	2025-03-05	2024-05-03	3.22	3.46	3.16	3.4	0.006	0.91	0.0	0.05	16.43	0.01	2.319	3.63	0.00	2.6	97.4	0.0	-1.38	0.55	0.79	3.30	3.5	0.003	0.61	0.0	0.04	16.69	0.00	2.505	3.48	1.17	2.9	97.1	0.0	3.13	0.82	0.58	0.81	2.13	3256	423	2	0	1	0	0	logfile
✔	8ZDZ	60018	2025-01-18	2024-05-03	2.64	3.50	2.71	3.3	0.004	0.63	0.0	0.04	17.96	0.00	2.260	6.41	2.35	2.7	97.3	0.0	2.47	0.61	0.84	1.84	3.3	0.003	0.67	0.0	0.04	17.93	0.00	2.506	5.30	2.27	2.9	97.1	0.0	4.02	1.41	0.58	0.81	2.14	12024	1496	4	0	0	0	0	logfile

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