Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9BM3	44686	2025-05-22	2024-05-02	3.49	3.92	3.71	3.8	0.004	0.68	0.0	0.04	16.65	0.01	2.163	12.54	0.54	2.4	97.6	0.0	1.04	0.77	0.81	1.59	3.8	0.003	0.61	0.0	0.04	16.90	0.00	2.402	9.08	1.79	2.1	97.9	0.0	1.72	0.38	0.74	0.82	1.39	21867	2711	2	0	4	0	0	logfile
✔	9BM8	44691	2025-06-21	2024-05-02	3.22	3.62	3.38	3.6	0.003	0.59	0.0	0.04	14.75	0.00	1.716	9.88	0.04	2.7	97.3	0.0	1.80	0.75	0.81	2.26	3.6	0.002	0.54	0.0	0.04	16.24	0.00	2.483	7.44	1.31	2.7	97.2	0.0	2.07	0.91	0.69	0.83	2.10	24220	2991	2	0	4	0	0	logfile
✔	9BLZ	44682	2025-06-21	2024-05-02	2.2	2.44	2.37	2.4	0.004	0.66	0.0	0.04	14.01	0.00	1.876	9.63	0.04	1.5	98.5	0.0	1.39	0.77	0.84	4.40	2.4	0.004	0.62	0.0	0.04	16.37	0.00	1.873	5.96	1.64	1.4	98.6	0.0	2.00	0.70	0.73	0.84	4.47	25189	2889	2	0	6	1857	0	logfile
✔	9BM8	44691	2025-05-23	2024-05-02	3.22	3.62	3.38	3.6	0.003	0.59	0.0	0.04	14.75	0.00	1.716	9.88	0.04	2.7	97.3	0.0	1.80	0.75	0.81	2.26	3.6	0.003	0.56	0.0	0.04	16.23	0.00	2.473	7.23	1.46	2.9	97.1	0.0	2.07	0.91	0.69	0.83	1.99	24220	2991	2	0	4	0	0	logfile
✔	9BLZ	44682	2025-05-24	2024-05-02	2.2	2.44	2.37	2.4	0.004	0.66	0.0	0.04	14.01	0.00	1.876	9.63	0.04	1.5	98.5	0.0	1.39	0.77	0.84	4.40	2.4	0.003	0.59	0.0	0.04	16.44	0.00	1.900	6.20	1.44	1.2	98.8	0.0	2.04	0.70	0.73	0.84	4.40	25189	2889	2	0	6	1857	0	logfile
✔	9BMU	44711	2025-06-19	2024-05-02	3.7	4.21	3.96	4.0	0.004	0.73	0.0	0.04	14.95	0.00	2.018	20.22	0.00	3.4	96.6	0.0	0.53	0.79	0.76	0.90	4.0	0.004	0.76	0.0	0.04	16.89	0.00	2.449	16.27	2.38	3.2	96.8	0.0	0.87	1.16	0.79	0.77	0.75	21776	2698	2	0	4	0	0	logfile
✔	9BMU	44711	2025-05-22	2024-05-02	3.7	4.21	3.96	4.0	0.004	0.73	0.0	0.04	14.95	0.00	2.018	20.22	0.00	3.4	96.6	0.0	0.53	0.79	0.76	0.90	4.0	0.004	0.73	0.0	0.04	16.94	0.00	2.478	15.37	2.42	3.2	96.8	0.0	0.90	1.16	0.79	0.77	0.71	21776	2698	2	0	4	0	0	logfile
✔	9BM2	44685	2025-05-22	2024-05-02	2.82	3.10	2.93	3.2	0.004	0.63	0.0	0.04	14.49	0.00	1.891	7.18	0.00	1.3	98.7	0.0	2.16	0.72	0.89	3.96	3.2	0.003	0.51	0.0	0.04	16.51	0.00	1.910	5.51	1.46	1.3	98.7	0.0	2.66	0.95	0.66	0.88	3.52	23046	2859	2	0	6	7	0	logfile
✔	9BN0	44717	2025-06-20	2024-05-02	3.6	3.98	3.82	3.8	0.005	0.72	0.0	0.05	16.97	0.00	1.515	11.56	0.46	2.3	97.6	0.1	1.54	0.70	0.64	0.58	3.9	0.003	0.71	0.0	0.04	17.61	0.00	1.896	11.86	2.01	2.6	97.3	0.0	1.70	1.70	0.78	0.80	1.03	23497	2909	2	0	5	0	0	logfile
✔	9BN4	44721	2025-06-20	2024-05-02	2.9	3.20	3.03	3.3	0.004	0.71	0.0	0.04	14.83	0.01	2.098	11.61	0.04	2.5	97.3	0.1	0.80	0.67	0.78	2.25	3.2	0.003	0.64	0.0	0.04	17.03	0.00	2.480	9.57	2.44	2.8	97.1	0.1	1.27	0.54	0.64	0.77	2.29	23078	2855	2	0	4	0	0	logfile
✔	9BMV	44712	2025-05-24	2024-05-02	3.7	4.07	3.89	3.9	0.003	0.62	0.0	0.04	14.58	0.01	1.916	13.40	0.04	2.6	97.4	0.0	1.66	0.80	0.81	1.17	3.9	0.004	0.70	0.0	0.04	16.39	0.00	1.905	12.27	1.81	2.8	97.2	0.0	1.58	1.16	0.80	0.82	1.19	24616	3043	2	0	5	0	0	logfile
✔	9BMC	44695	2025-06-21	2024-05-02	3.5	3.84	3.61	3.8	0.004	0.58	0.0	0.04	14.79	0.00	1.903	9.42	0.04	2.5	97.5	0.0	1.50	0.78	0.80	1.62	3.8	0.003	0.56	0.0	0.04	16.37	0.00	1.916	8.06	1.55	2.5	97.5	0.0	2.21	1.21	0.74	0.78	1.16	24617	3043	2	0	6	0	0	logfile
✔	9BMC	44695	2025-05-24	2024-05-02	3.5	3.84	3.61	3.8	0.004	0.58	0.0	0.04	14.79	0.00	1.903	9.42	0.04	2.5	97.5	0.0	1.50	0.78	0.80	1.62	3.8	0.003	0.55	0.0	0.04	16.41	0.00	1.940	7.76	1.77	2.5	97.5	0.0	2.25	1.21	0.74	0.78	1.10	24617	3043	2	0	6	0	0	logfile
✔	9BN4	44721	2025-05-22	2024-05-02	2.9	3.20	3.03	3.3	0.004	0.71	0.0	0.04	14.83	0.01	2.098	11.61	0.04	2.5	97.3	0.1	0.80	0.67	0.78	2.25	3.2	0.003	0.64	0.0	0.04	17.07	0.00	2.440	9.59	2.13	3.1	96.8	0.1	1.19	0.56	0.64	0.77	2.26	23078	2855	2	0	4	0	0	logfile
✔	9BMM	44703	2025-05-22	2024-05-02	3.1	3.62	3.37	3.6	0.003	0.54	0.0	0.04	16.21	0.00	1.921	6.01	0.24	1.5	98.5	0.0	1.50	0.74	0.86	2.34	3.6	0.002	0.50	0.0	0.04	16.43	0.00	1.980	5.25	1.46	1.5	98.5	0.0	2.71	0.32	0.71	0.85	2.25	23038	2859	2	0	5	0	0	logfile
✔	9BM0	44683	2025-06-20	2024-05-02	2.8	3.15	2.95	3.1	0.007	0.63	0.0	0.05	16.58	0.01	1.958	8.84	0.84	1.3	98.7	0.0	1.53	0.74	0.88	3.74	3.1	0.004	0.54	0.0	0.04	17.31	0.00	1.892	5.51	2.34	1.4	98.6	0.0	2.31	0.47	0.62	0.84	3.39	23710	2937	2	0	6	3	0	logfile
✔	9BM0	44683	2025-05-23	2024-05-02	2.8	3.15	2.95	3.1	0.007	0.63	0.0	0.05	16.58	0.01	1.958	8.84	0.84	1.3	98.7	0.0	1.53	0.74	0.88	3.74	3.1	0.002	0.51	0.0	0.04	17.23	0.00	1.948	5.57	1.88	1.3	98.7	0.0	2.55	0.48	0.62	0.84	3.15	23710	2937	2	0	6	3	0	logfile
✔	9BMJ	44701	2025-06-20	2024-05-02	3.1	3.44	3.23	3.4	0.003	0.51	0.0	0.04	14.63	0.00	1.978	7.83	0.00	1.6	98.4	0.0	2.13	0.71	0.84	2.15	3.4	0.002	0.50	0.0	0.04	16.20	0.00	1.979	5.65	1.54	1.6	98.4	0.0	2.60	0.49	0.65	0.82	1.99	23706	2937	2	0	5	0	0	logfile
✔	9BMJ	44701	2025-05-23	2024-05-02	3.1	3.44	3.23	3.4	0.003	0.51	0.0	0.04	14.63	0.00	1.978	7.83	0.00	1.6	98.4	0.0	2.13	0.71	0.84	2.15	3.4	0.003	0.52	0.0	0.04	16.26	0.00	1.948	5.78	1.69	1.7	98.3	0.0	2.42	0.50	0.66	0.83	2.09	23706	2937	2	0	5	0	0	logfile
✔	9BM7	44690	2025-06-19	2024-05-02	3.58	4.09	3.78	4.0	0.004	0.69	0.0	0.04	17.58	0.01	2.125	13.92	0.58	3.0	96.9	0.1	1.66	0.79	0.84	1.07	4.0	0.004	0.65	0.0	0.04	17.75	0.00	2.462	10.18	2.46	2.8	97.1	0.1	1.83	0.36	0.79	0.84	0.96	21818	2703	2	0	4	0	0	logfile

• ← previous
• Page 245 of 5208
• next →